RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 KIF13BQ9NQT8 1826 aa4.24□□□□□ -1.73
RGPD1-203ENST00000428128 PTGDRQ13258 359 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 PLEKHG6Q3KR16 790 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 GPATCH11Q8N954 259 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 GIPC2Q8TF65 315 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 MTA3Q9BTC8 594 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 ERVK-7P63135 1459 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.23□□□□□ -1.73
RGPD1-203ENST00000428128 KIAA1210Q9ULL0 1709 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 SDR16C5Q8N3Y7 309 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 SCYL1Q96KG9 808 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 ZMIZ1Q9ULJ6 1067 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 CLK2P49760 499 aaKnown RBP4.23□□□□□ -1.73
RGPD1-203ENST00000428128 IGBP1P78318 339 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 BSDC1Q9NW68 430 aaPredicted RBP4.23□□□□□ -1.73
RGPD1-203ENST00000428128 CHPF2Q9P2E5 772 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 FARP1Q9Y4F1 1045 aaPredicted RBP4.23□□□□□ -1.73
RGPD1-203ENST00000428128 CARMIL1Q5VZK9 1371 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 FMN2Q9NZ56 1722 aa4.23□□□□□ -1.73
RGPD1-203ENST00000428128 CREB3O43889 395 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 ECM1Q16610 540 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 SOGA3Q5TF21 947 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 SSTR3P32745 418 aaPredicted RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 SOX11P35716 441 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 TCEAL1Q15170 157 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 POTEGQ6S5H5 508 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 ZCRB1Q8TBF4 217 aaKnown RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 TGIF2Q9GZN2 237 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 PIF1Q9H611 641 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 PRM3Q9NNZ6 103 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 BRWD3Q6RI45 1802 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 TROQ12816 1431 aaPredicted RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 CASKIN1Q8WXD9 1431 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 ANKRD33BA6NCL7 494 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 SCAMP3O14828 347 aaKnown RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 CCDC144BQ3MJ40 725 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 CLP1Q92989 425 aaKnown RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 EPAS1Q99814 870 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 GPHNQ9NQX3 736 aaPredicted RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 METTL5Q9NRN9 209 aaKnown RBP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.22□□□□□ -1.73
RGPD1-203ENST00000428128 PIK3R4Q99570 1358 aa4.22□□□□□ -1.73
RGPD1-203ENST00000428128 PYGBP11216 843 aa4.21□□□□□ -1.74
RGPD1-203ENST00000428128 TTLL12Q14166 644 aaPredicted RBP4.21□□□□□ -1.74
RGPD1-203ENST00000428128 HSP90AB2PQ58FF8 381 aa4.21□□□□□ -1.74
RGPD1-203ENST00000428128 MAFBQ9Y5Q3 323 aaPredicted RBP4.21□□□□□ -1.74
RGPD1-203ENST00000428128 BCL9LQ86UU0 1499 aa4.21□□□□□ -1.74
RGPD1-203ENST00000428128 COL6A1P12109 1028 aa4.21□□□□□ -1.74
RGPD1-203ENST00000428128 MYBPC2Q14324 1141 aa4.21□□□□□ -1.74
RGPD1-203ENST00000428128 ZNF526Q8TF50 670 aaPredicted RBP4.21□□□□□ -1.74
RGPD1-203ENST00000428128 CHMP7Q8WUX9 453 aaPredicted RBP4.21□□□□□ -1.74
RGPD1-203ENST00000428128 FAM208AQ9UK61 1670 aaKnown RBP4.21□□□□□ -1.74
RGPD1-203ENST00000428128 NAP1L5Q96NT1 182 aaPredicted RBP4.2□□□□□ -1.74
RGPD1-203ENST00000428128 IRF2BPLQ9H1B7 796 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 MYOM1P52179 1685 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 SBF2Q86WG5 1849 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 LIG1P18858 919 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 PPP1R15BQ5SWA1 713 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 KRBA2Q6ZNG9 492 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 MKRN1Q9UHC7 482 aaKnown RBP4.2□□□□□ -1.74
RGPD1-203ENST00000428128 TBC1D2BQ9UPU7 963 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 SPTLC1O15269 473 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 GYS2P54840 703 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 DIXDC1Q155Q3 683 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 MKL1Q969V6 931 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 ASB16Q96NS5 453 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 PHOX2BQ99453 314 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 GNL3LQ9NVN8 582 aaKnown RBP4.2□□□□□ -1.74
RGPD1-203ENST00000428128 NDUFB9Q9Y6M9 179 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 MYO5BQ9ULV0 1848 aa4.2□□□□□ -1.74
RGPD1-203ENST00000428128 CAMTA1Q9Y6Y1 1673 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 FGAP02671 866 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 ERCC5P28715 1186 aaPredicted RBP4.19□□□□□ -1.74
RGPD1-203ENST00000428128 PSEN1P49768 467 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 TSHZ1Q6ZSZ6 1077 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 NFATC2IPQ8NCF5 419 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 STAG1Q8WVM7 1258 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 C8orf48Q96LL4 319 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 PHF8Q9UPP1 1060 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 ITSN1Q15811 1721 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 CEP162Q5TB80 1403 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 ERBINQ96RT1 1412 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 ZNF700Q9H0M5 742 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 DPYSL4O14531 572 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 TMEM164Q5U3C3 297 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 PLEKHM2Q8IWE5 1019 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 BEGAINQ9BUH8 593 aa4.19□□□□□ -1.74
RGPD1-203ENST00000428128 LILRB3O75022 631 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 PRIM1P49642 420 aaKnown RBP4.18□□□□□ -1.74
RGPD1-203ENST00000428128 CCSAPQ6IQ19 270 aaPredicted RBP4.18□□□□□ -1.74
RGPD1-203ENST00000428128 FAM43BQ6ZT52 329 aaPredicted RBP4.18□□□□□ -1.74
RGPD1-203ENST00000428128 RNF135Q8IUD6 432 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 PRDM10Q9NQV6 1147 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 FMN1Q68DA7 1419 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
RGPD1-203ENST00000428128 PCDH12Q9NPG4 1184 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 ANKRD26Q9UPS8 1709 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 CFAP69A5D8W1 941 aa4.18□□□□□ -1.74
RGPD1-203ENST00000428128 PTMSP20962 102 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms