RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NFATC2IPQ8NCF5 419 aa27.7■■■□□ 2.02
HSPG2-205ENST00000427897 TAF1LQ8IZX4 1826 aa27.69■■■□□ 2.02
HSPG2-205ENST00000427897 COL23A1Q86Y22 540 aaPredicted RBP27.69■■■□□ 2.02
HSPG2-205ENST00000427897 TUBGCP6Q96RT7 1819 aa27.69■■■□□ 2.02
HSPG2-205ENST00000427897 KDM6AO15550 1401 aaPredicted RBP27.68■■■□□ 2.02
HSPG2-205ENST00000427897 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
HSPG2-205ENST00000427897 PHF14O94880 888 aa27.67■■■□□ 2.02
HSPG2-205ENST00000427897 KLHL34Q8N239 644 aa27.67■■■□□ 2.02
HSPG2-205ENST00000427897 C4BP0C0L5 1744 aa27.66■■■□□ 2.02
HSPG2-205ENST00000427897 LINC00116Q8NCU8 138 aa27.65■■■□□ 2.02
HSPG2-205ENST00000427897 FHDC1Q9C0D6 1143 aaPredicted RBP27.65■■■□□ 2.02
HSPG2-205ENST00000427897 COL3A1P02461 1466 aaPredicted RBP27.64■■■□□ 2.02
HSPG2-205ENST00000427897 PTCD1O75127 700 aaKnown RBP27.64■■■□□ 2.02
HSPG2-205ENST00000427897 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.02
HSPG2-205ENST00000427897 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.02
HSPG2-205ENST00000427897 SGIP1Q9BQI5 828 aa27.64■■■□□ 2.02
HSPG2-205ENST00000427897 GNPATO15228 680 aa27.63■■■□□ 2.01
HSPG2-205ENST00000427897 RNMTO43148 476 aaKnown RBP27.63■■■□□ 2.01
HSPG2-205ENST00000427897 ITPK1Q13572 414 aa27.63■■■□□ 2.01
HSPG2-205ENST00000427897 GAS2L2Q8NHY3 880 aa27.63■■■□□ 2.01
HSPG2-205ENST00000427897 LGR6Q9HBX8 967 aa27.63■■■□□ 2.01
HSPG2-205ENST00000427897 SLC52A2Q9HAB3 445 aa27.62■■■□□ 2.01
HSPG2-205ENST00000427897 SCN11AQ9UI33 1791 aa27.62■■■□□ 2.01
HSPG2-205ENST00000427897 DDX10Q13206 875 aaKnown RBP27.61■■■□□ 2.01
HSPG2-205ENST00000427897 MSL1Q68DK7 614 aa27.61■■■□□ 2.01
HSPG2-205ENST00000427897 SYT17Q9BSW7 474 aa27.61■■■□□ 2.01
HSPG2-205ENST00000427897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.6■■■□□ 2.01
HSPG2-205ENST00000427897 SSFA2P28290 1259 aa27.6■■■□□ 2.01
HSPG2-205ENST00000427897 PRKAR2BP31323 418 aa27.59■■■□□ 2.01
HSPG2-205ENST00000427897 GNAT3A8MTJ3 354 aa27.58■■■□□ 2.01
HSPG2-205ENST00000427897 NEFMP07197 916 aa27.58■■■□□ 2.01
HSPG2-205ENST00000427897 RTCBQ9Y3I0 505 aaKnown RBP27.58■■■□□ 2.01
HSPG2-205ENST00000427897 TEFQ10587 303 aa27.56■■■□□ 2
HSPG2-205ENST00000427897 SMIM5Q71RC9 77 aa27.56■■■□□ 2
HSPG2-205ENST00000427897 TRAPPC3LQ5T215 181 aa27.55■■■□□ 2
HSPG2-205ENST00000427897 SLC4A9Q96Q91 983 aa27.55■■■□□ 2
HSPG2-205ENST00000427897 RSPH6AQ9H0K4 717 aa27.55■■■□□ 2
HSPG2-205ENST00000427897 MAP3K5Q99683 1374 aa27.55■■■□□ 2
HSPG2-205ENST00000427897 RC3H1Q5TC82 1133 aaKnown RBP27.54■■■□□ 2
HSPG2-205ENST00000427897 VIRMAQ69YN4 1812 aaKnown RBP27.54■■■□□ 2
HSPG2-205ENST00000427897 UBR3Q6ZT12 1888 aa27.54■■■□□ 2
HSPG2-205ENST00000427897 FCHSD2O94868 740 aa27.53■■■□□ 2
HSPG2-205ENST00000427897 SLC39A6Q13433 755 aa27.52■■■□□ 2
HSPG2-205ENST00000427897 TTC5Q8N0Z6 440 aa27.52■■■□□ 2
HSPG2-205ENST00000427897 ZNF831Q5JPB2 1677 aa27.52■■■□□ 2
HSPG2-205ENST00000427897 RALBP1Q15311 655 aa27.51■■□□□ 1.99
HSPG2-205ENST00000427897 AMIGO3Q86WK7 504 aa27.51■■□□□ 1.99
HSPG2-205ENST00000427897 RTF1Q92541 710 aaKnown RBP27.51■■□□□ 1.99
HSPG2-205ENST00000427897 PHACTR3Q96KR7 559 aa27.51■■□□□ 1.99
HSPG2-205ENST00000427897 CNTNAP4Q9C0A0 1308 aa27.5■■□□□ 1.99
HSPG2-205ENST00000427897 RFC4P35249 363 aa27.5■■□□□ 1.99
HSPG2-205ENST00000427897 RPS6KA4O75676 772 aa27.49■■□□□ 1.99
HSPG2-205ENST00000427897 COL24A1Q17RW2 1714 aa27.48■■□□□ 1.99
HSPG2-205ENST00000427897 CRKLP46109 303 aaKnown RBP27.48■■□□□ 1.99
HSPG2-205ENST00000427897 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
HSPG2-205ENST00000427897 ADRA2BP18089 450 aa27.47■■□□□ 1.99
HSPG2-205ENST00000427897 IL17REQ8NFR9 667 aa27.47■■□□□ 1.99
HSPG2-205ENST00000427897 PNNQ9H307 717 aaKnown RBP27.47■■□□□ 1.99
HSPG2-205ENST00000427897 MRC1P22897 1456 aa27.46■■□□□ 1.99
HSPG2-205ENST00000427897 GPR162Q16538 588 aa27.46■■□□□ 1.99
HSPG2-205ENST00000427897 COL5A3P25940 1745 aaPredicted RBP27.45■■□□□ 1.99
HSPG2-205ENST00000427897 DNAJC10Q8IXB1 793 aa27.45■■□□□ 1.98
HSPG2-205ENST00000427897 ARHGEF1Q92888 912 aaKnown RBP27.45■■□□□ 1.98
HSPG2-205ENST00000427897 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
HSPG2-205ENST00000427897 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
HSPG2-205ENST00000427897 BTBD11A6QL63 1104 aa27.41■■□□□ 1.98
HSPG2-205ENST00000427897 YY1P25490 414 aa27.41■■□□□ 1.98
HSPG2-205ENST00000427897 VSIG10Q8N0Z9 540 aa27.41■■□□□ 1.98
HSPG2-205ENST00000427897 CCDC87Q9NVE4 849 aa27.41■■□□□ 1.98
HSPG2-205ENST00000427897 NLGN2Q8NFZ4 835 aa27.4■■□□□ 1.98
HSPG2-205ENST00000427897 MAPK8IP3Q9UPT6 1336 aa27.4■■□□□ 1.98
HSPG2-205ENST00000427897 TJP1Q07157 1748 aa27.39■■□□□ 1.98
HSPG2-205ENST00000427897 STARD3NLO95772 234 aa27.39■■□□□ 1.98
HSPG2-205ENST00000427897 ZNF790Q6PG37 636 aa27.39■■□□□ 1.98
HSPG2-205ENST00000427897 CD2APQ9Y5K6 639 aa27.39■■□□□ 1.98
HSPG2-205ENST00000427897 MMP10P09238 476 aa27.38■■□□□ 1.97
HSPG2-205ENST00000427897 CYP19A1P11511 503 aaPredicted RBP27.38■■□□□ 1.97
HSPG2-205ENST00000427897 INTS5Q6P9B9 1019 aaKnown RBP27.38■■□□□ 1.97
HSPG2-205ENST00000427897 MCM10Q7L590 875 aa27.38■■□□□ 1.97
HSPG2-205ENST00000427897 MYBBP1AQ9BQG0 1328 aaKnown RBP27.38■■□□□ 1.97
HSPG2-205ENST00000427897 HTATSF1O43719 755 aaKnown RBP27.37■■□□□ 1.97
HSPG2-205ENST00000427897 FMNL2Q96PY5 1086 aa27.37■■□□□ 1.97
HSPG2-205ENST00000427897 TEX13AQ9BXU3 409 aaPredicted RBP27.37■■□□□ 1.97
HSPG2-205ENST00000427897 ZPR1O75312 459 aa27.36■■□□□ 1.97
HSPG2-205ENST00000427897 MYH14Q7Z406 1995 aaKnown RBP27.36■■□□□ 1.97
HSPG2-205ENST00000427897 KCPQ6ZWJ8 1503 aa27.36■■□□□ 1.97
HSPG2-205ENST00000427897 PARP3Q9Y6F1 533 aa27.35■■□□□ 1.97
HSPG2-205ENST00000427897 CEMIPQ8WUJ3 1361 aa27.35■■□□□ 1.97
HSPG2-205ENST00000427897 GYS1P13807 737 aa27.34■■□□□ 1.97
HSPG2-205ENST00000427897 DCTN1Q14203 1278 aa27.34■■□□□ 1.97
HSPG2-205ENST00000427897 NPM2Q86SE8 214 aaKnown RBP27.34■■□□□ 1.97
HSPG2-205ENST00000427897 ZNF496Q96IT1 587 aaPredicted RBP27.34■■□□□ 1.97
HSPG2-205ENST00000427897 CICQ96RK0 1608 aaPredicted RBP27.34■■□□□ 1.97
HSPG2-205ENST00000427897 CANXP27824 592 aaKnown RBP27.33■■□□□ 1.97
HSPG2-205ENST00000427897 SRP68Q9UHB9 627 aaKnown RBP27.32■■□□□ 1.96
HSPG2-205ENST00000427897 HEG1Q9ULI3 1381 aa27.32■■□□□ 1.96
HSPG2-205ENST00000427897 SIPA1L3O60292 1781 aaPredicted RBP27.31■■□□□ 1.96
HSPG2-205ENST00000427897 UBR2Q8IWV8 1755 aa27.31■■□□□ 1.96
HSPG2-205ENST00000427897 WDR43Q15061 677 aaKnown RBP eCLIP27.31■■□□□ 1.96
HSPG2-205ENST00000427897 PLEKHF1Q96S99 279 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms