RNA–Protein interactions for RNA: ENST00000427570.1

NXF3-202, Transcript of nuclear RNA export factor 3, humanhuman

TSL 1 (best)

Gene NXF3, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-202ENST00000427570 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
NXF3-202ENST00000427570 GNPATO15228 680 aa11.19□□□□□ -0.62
NXF3-202ENST00000427570 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
NXF3-202ENST00000427570 ITPK1Q13572 414 aa11.19□□□□□ -0.62
NXF3-202ENST00000427570 TRAPPC3LQ5T215 181 aa11.19□□□□□ -0.62
NXF3-202ENST00000427570 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
NXF3-202ENST00000427570 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
NXF3-202ENST00000427570 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
NXF3-202ENST00000427570 CABP4P57796 275 aa11.18□□□□□ -0.62
NXF3-202ENST00000427570 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
NXF3-202ENST00000427570 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
NXF3-202ENST00000427570 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
NXF3-202ENST00000427570 UTRNP46939 3433 aa11.17□□□□□ -0.62
NXF3-202ENST00000427570 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
NXF3-202ENST00000427570 MTHFSP49914 203 aa11.17□□□□□ -0.62
NXF3-202ENST00000427570 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
NXF3-202ENST00000427570 NLGN1Q8N2Q7 840 aa11.17□□□□□ -0.62
NXF3-202ENST00000427570 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
NXF3-202ENST00000427570 ADRA2BP18089 450 aa11.16□□□□□ -0.62
NXF3-202ENST00000427570 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
NXF3-202ENST00000427570 SMIM5Q71RC9 77 aa11.16□□□□□ -0.62
NXF3-202ENST00000427570 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
NXF3-202ENST00000427570 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
NXF3-202ENST00000427570 KDRP35968 1356 aa11.15□□□□□ -0.63
NXF3-202ENST00000427570 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 RPS6KA4O75676 772 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 MMP10P09238 476 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 RFC4P35249 363 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 TGFB2P61812 414 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 NFATC2IPQ8NCF5 419 aa11.14□□□□□ -0.63
NXF3-202ENST00000427570 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
NXF3-202ENST00000427570 IL13P35225 146 aa11.13□□□□□ -0.63
NXF3-202ENST00000427570 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
NXF3-202ENST00000427570 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
NXF3-202ENST00000427570 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
NXF3-202ENST00000427570 ATP10DQ9P241 1426 aa11.12□□□□□ -0.63
NXF3-202ENST00000427570 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
NXF3-202ENST00000427570 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
NXF3-202ENST00000427570 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
NXF3-202ENST00000427570 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
NXF3-202ENST00000427570 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
NXF3-202ENST00000427570 GYS1P13807 737 aa11.11□□□□□ -0.63
NXF3-202ENST00000427570 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
NXF3-202ENST00000427570 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
NXF3-202ENST00000427570 ADCY9O60503 1353 aa11.1□□□□□ -0.63
NXF3-202ENST00000427570 SCN11AQ9UI33 1791 aa11.1□□□□□ -0.63
NXF3-202ENST00000427570 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
NXF3-202ENST00000427570 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
NXF3-202ENST00000427570 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
NXF3-202ENST00000427570 WWC3Q9ULE0 1092 aa11.09□□□□□ -0.63
NXF3-202ENST00000427570 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
NXF3-202ENST00000427570 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
NXF3-202ENST00000427570 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 A0A0G2JLW4 131 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
NXF3-202ENST00000427570 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 BCS1LQ9Y276 419 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 C10orf71Q711Q0 1435 aa11.08□□□□□ -0.64
NXF3-202ENST00000427570 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
NXF3-202ENST00000427570 DPEP1P16444 411 aa11.07□□□□□ -0.64
NXF3-202ENST00000427570 ZNF526Q8TF50 670 aaPredicted RBP11.07□□□□□ -0.64
NXF3-202ENST00000427570 LGR6Q9HBX8 967 aa11.07□□□□□ -0.64
NXF3-202ENST00000427570 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
NXF3-202ENST00000427570 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
NXF3-202ENST00000427570 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 GOLGB1Q14789 3259 aaKnown RBP11.06□□□□□ -0.64
NXF3-202ENST00000427570 ZPR1O75312 459 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 FCHSD2O94868 740 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 HMOX1P09601 288 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
NXF3-202ENST00000427570 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 PIM2Q9P1W9 311 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 TJP1Q07157 1748 aa11.06□□□□□ -0.64
NXF3-202ENST00000427570 KCNA3P22001 575 aa11.05□□□□□ -0.64
NXF3-202ENST00000427570 TM4SF1P30408 202 aa11.05□□□□□ -0.64
NXF3-202ENST00000427570 FKBP8Q14318 412 aa11.05□□□□□ -0.64
NXF3-202ENST00000427570 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
NXF3-202ENST00000427570 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
NXF3-202ENST00000427570 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
NXF3-202ENST00000427570 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
NXF3-202ENST00000427570 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
NXF3-202ENST00000427570 HSPA6P17066 643 aa11.04□□□□□ -0.64
NXF3-202ENST00000427570 SRP68Q9UHB9 627 aaKnown RBP11.04□□□□□ -0.64
NXF3-202ENST00000427570 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
NXF3-202ENST00000427570 VIRMAQ69YN4 1812 aaKnown RBP11.04□□□□□ -0.64
NXF3-202ENST00000427570 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 KIF3CO14782 793 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 DDR1Q08345 913 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
NXF3-202ENST00000427570 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 MRC1P22897 1456 aa11.03□□□□□ -0.64
NXF3-202ENST00000427570 BRCA1P38398 1863 aaKnown RBP11.03□□□□□ -0.64
NXF3-202ENST00000427570 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
NXF3-202ENST00000427570 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.64
NXF3-202ENST00000427570 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
NXF3-202ENST00000427570 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
NXF3-202ENST00000427570 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.65
NXF3-202ENST00000427570 ADAMTS7Q9UKP4 1686 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms