RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 AKT1S1Q96B36 256 aa20.88■□□□□ 0.93
CLK3P2-201ENST00000427566 SPON1Q9HCB6 807 aa20.88■□□□□ 0.93
CLK3P2-201ENST00000427566 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
CLK3P2-201ENST00000427566 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
CLK3P2-201ENST00000427566 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
CLK3P2-201ENST00000427566 ATF5Q9Y2D1 282 aaPredicted RBP20.87■□□□□ 0.93
CLK3P2-201ENST00000427566 PLEKHF1Q96S99 279 aa20.86■□□□□ 0.93
CLK3P2-201ENST00000427566 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
CLK3P2-201ENST00000427566 LGR6Q9HBX8 967 aa20.86■□□□□ 0.93
CLK3P2-201ENST00000427566 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
CLK3P2-201ENST00000427566 LOC102724428A0A0B4J2F2 783 aa20.85■□□□□ 0.93
CLK3P2-201ENST00000427566 MSH5O43196 834 aa20.85■□□□□ 0.93
CLK3P2-201ENST00000427566 SIK1P57059 783 aa20.85■□□□□ 0.93
CLK3P2-201ENST00000427566 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
CLK3P2-201ENST00000427566 ADAMTS8Q9UP79 889 aa20.84■□□□□ 0.93
CLK3P2-201ENST00000427566 RNMTO43148 476 aaKnown RBP20.83■□□□□ 0.93
CLK3P2-201ENST00000427566 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
CLK3P2-201ENST00000427566 PNPLA7Q6ZV29 1317 aa20.83■□□□□ 0.92
CLK3P2-201ENST00000427566 HMGB2P26583 209 aaKnown RBP20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 AK7Q96M32 723 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 UBR3Q6ZT12 1888 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 MAP3K5Q99683 1374 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 PTCD1O75127 700 aaKnown RBP20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 CCDC146Q8IYE0 955 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 DLG5Q8TDM6 1919 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 ADAMTS7Q9UKP4 1686 aa20.81■□□□□ 0.92
CLK3P2-201ENST00000427566 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
CLK3P2-201ENST00000427566 ITPK1Q13572 414 aa20.8■□□□□ 0.92
CLK3P2-201ENST00000427566 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
CLK3P2-201ENST00000427566 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
CLK3P2-201ENST00000427566 NEFMP07197 916 aa20.79■□□□□ 0.92
CLK3P2-201ENST00000427566 LINC00116Q8NCU8 138 aa20.79■□□□□ 0.92
CLK3P2-201ENST00000427566 PHF14O94880 888 aa20.78■□□□□ 0.92
CLK3P2-201ENST00000427566 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
CLK3P2-201ENST00000427566 ZNF831Q5JPB2 1677 aa20.78■□□□□ 0.92
CLK3P2-201ENST00000427566 MRC1P22897 1456 aa20.77■□□□□ 0.92
CLK3P2-201ENST00000427566 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
CLK3P2-201ENST00000427566 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.92
CLK3P2-201ENST00000427566 TEFQ10587 303 aa20.76■□□□□ 0.91
CLK3P2-201ENST00000427566 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
CLK3P2-201ENST00000427566 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
CLK3P2-201ENST00000427566 DCTN1Q14203 1278 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 SLC16A10Q8TF71 515 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 TJP1Q07157 1748 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 GNPATO15228 680 aa20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
CLK3P2-201ENST00000427566 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 PTGER2P43116 358 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 MCM10Q7L590 875 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 FLAD1Q8NFF5 587 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 SRCAPQ6ZRS2 3230 aa20.74■□□□□ 0.91
CLK3P2-201ENST00000427566 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
CLK3P2-201ENST00000427566 MSL1Q68DK7 614 aa20.73■□□□□ 0.91
CLK3P2-201ENST00000427566 RUNDC1Q96C34 613 aa20.73■□□□□ 0.91
CLK3P2-201ENST00000427566 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
CLK3P2-201ENST00000427566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
CLK3P2-201ENST00000427566 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
CLK3P2-201ENST00000427566 COL24A1Q17RW2 1714 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 CEMIPQ8WUJ3 1361 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 POLD1P28340 1107 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 KLHL34Q8N239 644 aa20.71■□□□□ 0.91
CLK3P2-201ENST00000427566 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
CLK3P2-201ENST00000427566 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
CLK3P2-201ENST00000427566 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
CLK3P2-201ENST00000427566 ARXQ96QS3 562 aa20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 SSFA2P28290 1259 aa20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 RIPK4P57078 832 aa20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 MIER1Q8N108 512 aa20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 SGIP1Q9BQI5 828 aa20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
CLK3P2-201ENST00000427566 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
CLK3P2-201ENST00000427566 CICQ96RK0 1608 aaPredicted RBP20.68■□□□□ 0.9
CLK3P2-201ENST00000427566 DNAJC10Q8IXB1 793 aa20.68■□□□□ 0.9
CLK3P2-201ENST00000427566 APAF1O14727 1248 aa20.67■□□□□ 0.9
CLK3P2-201ENST00000427566 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
CLK3P2-201ENST00000427566 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
CLK3P2-201ENST00000427566 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 CRKLP46109 303 aaKnown RBP20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 RC3H1Q5TC82 1133 aaKnown RBP20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 FHDC1Q9C0D6 1143 aaPredicted RBP20.66■□□□□ 0.9
CLK3P2-201ENST00000427566 TRAPPC3LQ5T215 181 aa20.65■□□□□ 0.9
CLK3P2-201ENST00000427566 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
CLK3P2-201ENST00000427566 KCNQ3O43525 872 aa20.63■□□□□ 0.89
CLK3P2-201ENST00000427566 RPS6KA4O75676 772 aa20.63■□□□□ 0.89
CLK3P2-201ENST00000427566 TRIM35Q9UPQ4 493 aa20.63■□□□□ 0.89
CLK3P2-201ENST00000427566 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
CLK3P2-201ENST00000427566 MIS18AQ9NYP9 233 aa20.62■□□□□ 0.89
CLK3P2-201ENST00000427566 RFC4P35249 363 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms