RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 U2AF2P26368 475 aaKnown RBP eCLIP9.02□□□□□ -0.96
LINC01108-201ENST00000427276 ZNF771Q7L3S4 317 aaPredicted RBP9.02□□□□□ -0.96
LINC01108-201ENST00000427276 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.96
LINC01108-201ENST00000427276 CFAP74Q9C0B2 1584 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 FERMT3Q86UX7 667 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 SMC3Q9UQE7 1217 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 WDR33Q9C0J8 1336 aaKnown RBP9.02□□□□□ -0.97
LINC01108-201ENST00000427276 RAPGEF3O95398 923 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 MX1P20591 662 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 KCNJ4P48050 445 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
LINC01108-201ENST00000427276 TET3O43151 1660 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 MCM2P49736 904 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 MYOM2P54296 1465 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 OS9Q13438 667 aaPredicted RBP9.01□□□□□ -0.97
LINC01108-201ENST00000427276 ATP2B3Q16720 1220 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 PPP4R3CPQ6ZMV5 832 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 PIBF1Q8WXW3 757 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 RTF1Q92541 710 aaKnown RBP9.01□□□□□ -0.97
LINC01108-201ENST00000427276 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
LINC01108-201ENST00000427276 CCDC183Q5T5S1 534 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC01108-201ENST00000427276 UNC5CLQ8IV45 518 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 C16orf45Q96MC5 204 aaPredicted RBP9.01□□□□□ -0.97
LINC01108-201ENST00000427276 STK31Q9BXU1 1019 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 KIF1BO60333 1816 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
LINC01108-201ENST00000427276 NPHP1O15259 732 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 CCDC83Q8IWF9 413 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 RIOK3O14730 519 aaKnown RBP9□□□□□ -0.97
LINC01108-201ENST00000427276 GNAI2P04899 355 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 CWC27Q6UX04 472 aaKnown RBP9□□□□□ -0.97
LINC01108-201ENST00000427276 CKAP2LQ8IYA6 745 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 PYCARDQ9ULZ3 195 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 SPG7Q9UQ90 795 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 DNM1Q05193 864 aaKnown RBP9□□□□□ -0.97
LINC01108-201ENST00000427276 MLECQ14165 292 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 PRIMPOLQ96LW4 560 aa9□□□□□ -0.97
LINC01108-201ENST00000427276 ATP7AQ04656 1500 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 FOXO3O43524 673 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 SURF6O75683 361 aaKnown RBP8.99□□□□□ -0.97
LINC01108-201ENST00000427276 FAM173BQ6P4H8 233 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 RTL1A6NKG5 1358 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 PNMA6EA0A0J9YXQ4 647 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 CHMLP26374 656 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 IL13P35225 146 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 FAM184AQ8NB25 1140 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 DIAPH3Q9NSV4 1193 aa8.99□□□□□ -0.97
LINC01108-201ENST00000427276 KIAA1210Q9ULL0 1709 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 KDM4AO75164 1064 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 PTGS1P23219 599 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 FBXO31Q5XUX0 539 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 PTCH1Q13635 1447 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 NPATQ14207 1427 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 GOLGA6L6A8MZA4 724 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 STX6O43752 255 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 CASTP20810 708 aaKnown RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 FOSBP53539 338 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 TRIM5Q9C035 493 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 LRRFIP2Q9Y608 721 aaKnown RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 TULP4Q9NRJ4 1543 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 ZNF853P0CG23 659 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 ZSCAN20P17040 1043 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 SYT1P21579 422 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 DMTNQ08495 405 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 TXNDC2Q86VQ3 553 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 NECAB1Q8N987 351 aa8.98□□□□□ -0.97
LINC01108-201ENST00000427276 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 V9GYY5 206 aaPredicted RBP8.98□□□□□ -0.97
LINC01108-201ENST00000427276 ZSCAN22P10073 491 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 EIF2S2P20042 333 aaKnown RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 AK2P54819 239 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 NAA30Q147X3 362 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 LTV1Q96GA3 475 aaPredicted RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 TCEANC2Q96MN5 208 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 IL25Q9H293 177 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 CGNQ9P2M7 1197 aaKnown RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 TFIP11Q9UBB9 837 aaKnown RBP8.97□□□□□ -0.97
LINC01108-201ENST00000427276 LRRC7Q96NW7 1537 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 MROH1Q8NDA8 1641 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 LRMPQ12912 555 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 LUZP1Q86V48 1076 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 MED14O60244 1454 aa8.97□□□□□ -0.97
LINC01108-201ENST00000427276 RIMS2Q9UQ26 1411 aa8.96□□□□□ -0.97
LINC01108-201ENST00000427276 UBE2HP62256 183 aa8.96□□□□□ -0.97
LINC01108-201ENST00000427276 CCDC186Q7Z3E2 898 aa8.96□□□□□ -0.97
LINC01108-201ENST00000427276 ADGRB2O60241 1585 aa8.96□□□□□ -0.97
LINC01108-201ENST00000427276 DEPDC5O75140 1603 aa8.96□□□□□ -0.97
LINC01108-201ENST00000427276 GJB2P29033 226 aa8.96□□□□□ -0.98
LINC01108-201ENST00000427276 CEBPZQ03701 1054 aaKnown RBP8.96□□□□□ -0.98
LINC01108-201ENST00000427276 STK3Q13188 491 aa8.96□□□□□ -0.98
LINC01108-201ENST00000427276 JAKMIP1Q96N16 626 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms