RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
COL11A1-204ENST00000427239 CHL1O00533 1208 aa20.09■□□□□ 0.81
COL11A1-204ENST00000427239 PIGBQ92521 554 aa20.09■□□□□ 0.81
COL11A1-204ENST00000427239 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
COL11A1-204ENST00000427239 KCNQ2O43526 872 aa20.08■□□□□ 0.81
COL11A1-204ENST00000427239 ZNF853P0CG23 659 aa20.08■□□□□ 0.81
COL11A1-204ENST00000427239 LAS1LQ9Y4W2 734 aaKnown RBP20.07■□□□□ 0.8
COL11A1-204ENST00000427239 MRC1P22897 1456 aa20.07■□□□□ 0.8
COL11A1-204ENST00000427239 E9PSI1 815 aa20.06■□□□□ 0.8
COL11A1-204ENST00000427239 MYH16Q9H6N6 1097 aa20.06■□□□□ 0.8
COL11A1-204ENST00000427239 TRIM37O94972 964 aa20.05■□□□□ 0.8
COL11A1-204ENST00000427239 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
COL11A1-204ENST00000427239 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
COL11A1-204ENST00000427239 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
COL11A1-204ENST00000427239 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
COL11A1-204ENST00000427239 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
COL11A1-204ENST00000427239 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
COL11A1-204ENST00000427239 SLFN5Q08AF3 891 aa20.04■□□□□ 0.8
COL11A1-204ENST00000427239 TTC5Q8N0Z6 440 aa20.03■□□□□ 0.8
COL11A1-204ENST00000427239 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
COL11A1-204ENST00000427239 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
COL11A1-204ENST00000427239 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
COL11A1-204ENST00000427239 DOT1LQ8TEK3 1739 aa20.03■□□□□ 0.8
COL11A1-204ENST00000427239 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
COL11A1-204ENST00000427239 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
COL11A1-204ENST00000427239 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
COL11A1-204ENST00000427239 SLC39A6Q13433 755 aa20.02■□□□□ 0.79
COL11A1-204ENST00000427239 TRMT2AQ8IZ69 625 aaKnown RBP20.02■□□□□ 0.79
COL11A1-204ENST00000427239 CDCA7LQ96GN5 454 aa20.02■□□□□ 0.79
COL11A1-204ENST00000427239 ITGB4P16144 1822 aa20.01■□□□□ 0.79
COL11A1-204ENST00000427239 PTF1AQ7RTS3 328 aa20.01■□□□□ 0.79
COL11A1-204ENST00000427239 NHSQ6T4R5 1651 aa20■□□□□ 0.79
COL11A1-204ENST00000427239 CCDC125Q86Z20 511 aa20■□□□□ 0.79
COL11A1-204ENST00000427239 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
COL11A1-204ENST00000427239 SBF2Q86WG5 1849 aa20■□□□□ 0.79
COL11A1-204ENST00000427239 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
COL11A1-204ENST00000427239 EIF4A1P60842 406 aaKnown RBP19.99■□□□□ 0.79
COL11A1-204ENST00000427239 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
COL11A1-204ENST00000427239 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
COL11A1-204ENST00000427239 KCNQ3O43525 872 aa19.98■□□□□ 0.79
COL11A1-204ENST00000427239 PLSCR1O15162 318 aa19.97■□□□□ 0.79
COL11A1-204ENST00000427239 APBA3O96018 575 aa19.97■□□□□ 0.79
COL11A1-204ENST00000427239 DUSP27Q5VZP5 1158 aa19.97■□□□□ 0.79
COL11A1-204ENST00000427239 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
COL11A1-204ENST00000427239 SF3B2Q13435 895 aaKnown RBP19.96■□□□□ 0.79
COL11A1-204ENST00000427239 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
COL11A1-204ENST00000427239 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
COL11A1-204ENST00000427239 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
COL11A1-204ENST00000427239 RBM42Q9BTD8 480 aaKnown RBP19.95■□□□□ 0.78
COL11A1-204ENST00000427239 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
COL11A1-204ENST00000427239 HMGB2P26583 209 aaKnown RBP19.94■□□□□ 0.78
COL11A1-204ENST00000427239 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
COL11A1-204ENST00000427239 SOS1Q07889 1333 aaPredicted RBP19.94■□□□□ 0.78
COL11A1-204ENST00000427239 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 SIK1P57059 783 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
COL11A1-204ENST00000427239 CHMP4AQ9BY43 222 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 BTAF1O14981 1849 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 GIGYF1O75420 1035 aaPredicted RBP19.93■□□□□ 0.78
COL11A1-204ENST00000427239 HOXB7P09629 217 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 EXOSC9Q06265 439 aaKnown RBP19.93■□□□□ 0.78
COL11A1-204ENST00000427239 ILDR2Q71H61 639 aa19.93■□□□□ 0.78
COL11A1-204ENST00000427239 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
COL11A1-204ENST00000427239 C8orf58Q8NAV2 365 aa19.92■□□□□ 0.78
COL11A1-204ENST00000427239 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
COL11A1-204ENST00000427239 CT47B1P0C2W7 299 aaPredicted RBP19.9■□□□□ 0.78
COL11A1-204ENST00000427239 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
COL11A1-204ENST00000427239 BAG6P46379 1132 aa19.9■□□□□ 0.78
COL11A1-204ENST00000427239 SLC27A3Q5K4L6 730 aa19.9■□□□□ 0.78
COL11A1-204ENST00000427239 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
COL11A1-204ENST00000427239 TWISTNBQ3B726 338 aaPredicted RBP19.9■□□□□ 0.78
COL11A1-204ENST00000427239 SLC4A9Q96Q91 983 aa19.9■□□□□ 0.78
COL11A1-204ENST00000427239 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
COL11A1-204ENST00000427239 KRT24Q2M2I5 525 aa19.89■□□□□ 0.77
COL11A1-204ENST00000427239 CCNL1Q9UK58 526 aaPredicted RBP19.89■□□□□ 0.77
COL11A1-204ENST00000427239 UBR2Q8IWV8 1755 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 TSPYL6Q8N831 410 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL11A1-204ENST00000427239 ZNF428Q96B54 188 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 VAMP4O75379 141 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 STARD3NLO95772 234 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
COL11A1-204ENST00000427239 PROM2Q8N271 834 aa19.87■□□□□ 0.77
COL11A1-204ENST00000427239 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
COL11A1-204ENST00000427239 CAMKK2Q96RR4 588 aa19.86■□□□□ 0.77
COL11A1-204ENST00000427239 PRAMEF22A3QJZ6 481 aa19.85■□□□□ 0.77
COL11A1-204ENST00000427239 EN1Q05925 392 aaPredicted RBP19.85■□□□□ 0.77
COL11A1-204ENST00000427239 DNAJC10Q8IXB1 793 aa19.85■□□□□ 0.77
COL11A1-204ENST00000427239 TNS1Q9HBL0 1735 aaKnown RBP19.85■□□□□ 0.77
COL11A1-204ENST00000427239 CYP19A1P11511 503 aaPredicted RBP19.84■□□□□ 0.77
COL11A1-204ENST00000427239 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
COL11A1-204ENST00000427239 ITPK1Q13572 414 aa19.84■□□□□ 0.77
COL11A1-204ENST00000427239 HDGFL1Q5TGJ6 251 aa19.84■□□□□ 0.77
COL11A1-204ENST00000427239 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
COL11A1-204ENST00000427239 LRRC4BQ9NT99 713 aa19.84■□□□□ 0.77
COL11A1-204ENST00000427239 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
COL11A1-204ENST00000427239 LY75O60449 1722 aa19.83■□□□□ 0.77
COL11A1-204ENST00000427239 EZH2Q15910 746 aaKnown RBP19.82■□□□□ 0.76
COL11A1-204ENST00000427239 KCNQ4P56696 695 aa19.82■□□□□ 0.76
COL11A1-204ENST00000427239 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms