RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.15
RPUSD3-205ENST00000427174 UBR2Q8IWV8 1755 aa28.51■■■□□ 2.15
RPUSD3-205ENST00000427174 C5P01031 1676 aa28.51■■■□□ 2.15
RPUSD3-205ENST00000427174 MAPK8IP3Q9UPT6 1336 aa28.5■■■□□ 2.15
RPUSD3-205ENST00000427174 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
RPUSD3-205ENST00000427174 SMARCC1Q92922 1105 aaPredicted RBP28.5■■■□□ 2.15
RPUSD3-205ENST00000427174 ATG3Q9NT62 314 aa28.5■■■□□ 2.15
RPUSD3-205ENST00000427174 LRRC4BQ9NT99 713 aa28.5■■■□□ 2.15
RPUSD3-205ENST00000427174 CCDC146Q8IYE0 955 aa28.49■■■□□ 2.15
RPUSD3-205ENST00000427174 RUNDC1Q96C34 613 aa28.49■■■□□ 2.15
RPUSD3-205ENST00000427174 CICQ96RK0 1608 aaPredicted RBP28.48■■■□□ 2.15
RPUSD3-205ENST00000427174 SLC27A3Q5K4L6 730 aa28.48■■■□□ 2.15
RPUSD3-205ENST00000427174 DIEXFQ68CQ4 756 aaKnown RBP28.46■■■□□ 2.15
RPUSD3-205ENST00000427174 TUBGCP6Q96RT7 1819 aa28.46■■■□□ 2.15
RPUSD3-205ENST00000427174 TMPOP42166 694 aaKnown RBP28.45■■■□□ 2.14
RPUSD3-205ENST00000427174 COL5A3P25940 1745 aaPredicted RBP28.45■■■□□ 2.14
RPUSD3-205ENST00000427174 QSER1Q2KHR3 1735 aa28.45■■■□□ 2.14
RPUSD3-205ENST00000427174 MCM10Q7L590 875 aa28.44■■■□□ 2.14
RPUSD3-205ENST00000427174 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
RPUSD3-205ENST00000427174 CCNL1Q9UK58 526 aaPredicted RBP28.43■■■□□ 2.14
RPUSD3-205ENST00000427174 TJP1Q07157 1748 aa28.43■■■□□ 2.14
RPUSD3-205ENST00000427174 KCPQ6ZWJ8 1503 aa28.43■■■□□ 2.14
RPUSD3-205ENST00000427174 KCNQ4P56696 695 aa28.42■■■□□ 2.14
RPUSD3-205ENST00000427174 DCTN1Q14203 1278 aa28.42■■■□□ 2.14
RPUSD3-205ENST00000427174 RTF1Q92541 710 aaKnown RBP28.42■■■□□ 2.14
RPUSD3-205ENST00000427174 LOC102724428A0A0B4J2F2 783 aa28.41■■■□□ 2.14
RPUSD3-205ENST00000427174 SIK1P57059 783 aa28.41■■■□□ 2.14
RPUSD3-205ENST00000427174 TEFQ10587 303 aa28.41■■■□□ 2.14
RPUSD3-205ENST00000427174 KDM3BQ7LBC6 1761 aa28.41■■■□□ 2.14
RPUSD3-205ENST00000427174 RIPK4P57078 832 aa28.4■■■□□ 2.14
RPUSD3-205ENST00000427174 SLC4A9Q96Q91 983 aa28.4■■■□□ 2.14
RPUSD3-205ENST00000427174 C4BP0C0L5 1744 aa28.4■■■□□ 2.14
RPUSD3-205ENST00000427174 NBPF14Q5TI25 921 aa28.38■■■□□ 2.13
RPUSD3-205ENST00000427174 CASZ1Q86V15 1759 aa28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 MYH14Q7Z406 1995 aaKnown RBP28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 CCER2I3L3R5 266 aa28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 SLC39A6Q13433 755 aa28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 RRP7AQ9Y3A4 280 aaKnown RBP28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 UBR3Q6ZT12 1888 aa28.37■■■□□ 2.13
RPUSD3-205ENST00000427174 AKT1S1Q96B36 256 aa28.36■■■□□ 2.13
RPUSD3-205ENST00000427174 APAF1O14727 1248 aa28.35■■■□□ 2.13
RPUSD3-205ENST00000427174 ITPK1Q13572 414 aa28.35■■■□□ 2.13
RPUSD3-205ENST00000427174 ZNF827Q17R98 1081 aa28.35■■■□□ 2.13
RPUSD3-205ENST00000427174 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
RPUSD3-205ENST00000427174 R3HDM1Q15032 1099 aaKnown RBP28.34■■■□□ 2.13
RPUSD3-205ENST00000427174 SLC15A2Q16348 729 aa28.34■■■□□ 2.13
RPUSD3-205ENST00000427174 THUMPD2Q9BTF0 503 aaKnown RBP28.34■■■□□ 2.13
RPUSD3-205ENST00000427174 LMOD3Q0VAK6 560 aa28.33■■■□□ 2.13
RPUSD3-205ENST00000427174 ZNF790Q6PG37 636 aa28.33■■■□□ 2.13
RPUSD3-205ENST00000427174 PSDA5PKW4 1024 aaPredicted RBP28.32■■■□□ 2.12
RPUSD3-205ENST00000427174 PTCD1O75127 700 aaKnown RBP28.32■■■□□ 2.12
RPUSD3-205ENST00000427174 ATP6V1AP38606 617 aa28.32■■■□□ 2.12
RPUSD3-205ENST00000427174 RBM42Q9BTD8 480 aaKnown RBP28.32■■■□□ 2.12
RPUSD3-205ENST00000427174 STK32BQ9NY57 414 aa28.32■■■□□ 2.12
RPUSD3-205ENST00000427174 TAF7Q15545 349 aaPredicted RBP28.31■■■□□ 2.12
RPUSD3-205ENST00000427174 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
RPUSD3-205ENST00000427174 LINC00116Q8NCU8 138 aa28.31■■■□□ 2.12
RPUSD3-205ENST00000427174 BTBD11A6QL63 1104 aa28.3■■■□□ 2.12
RPUSD3-205ENST00000427174 HMGB2P26583 209 aaKnown RBP28.3■■■□□ 2.12
RPUSD3-205ENST00000427174 MIER1Q8N108 512 aa28.3■■■□□ 2.12
RPUSD3-205ENST00000427174 KCNQ3O43525 872 aa28.28■■■□□ 2.12
RPUSD3-205ENST00000427174 FAM9BQ8IZU0 186 aa28.28■■■□□ 2.12
RPUSD3-205ENST00000427174 TTC5Q8N0Z6 440 aa28.27■■■□□ 2.12
RPUSD3-205ENST00000427174 VSIG10Q8N0Z9 540 aa28.27■■■□□ 2.12
RPUSD3-205ENST00000427174 ZNF496Q96IT1 587 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-205ENST00000427174 HEG1Q9ULI3 1381 aa28.25■■■□□ 2.11
RPUSD3-205ENST00000427174 NCBP3Q53F19 620 aaKnown RBP28.25■■■□□ 2.11
RPUSD3-205ENST00000427174 MIS18AQ9NYP9 233 aa28.23■■■□□ 2.11
RPUSD3-205ENST00000427174 LAMB4A4D0S4 1761 aa28.23■■■□□ 2.11
RPUSD3-205ENST00000427174 COL24A1Q17RW2 1714 aa28.23■■■□□ 2.11
RPUSD3-205ENST00000427174 PNPLA7Q6ZV29 1317 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 CNTNAP4Q9C0A0 1308 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 RC3H1Q5TC82 1133 aaKnown RBP28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 DNAJC10Q8IXB1 793 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 FMNL2Q96PY5 1086 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 PDGFDQ9GZP0 370 aaPredicted RBP28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 BABAM1Q9NWV8 329 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 SRCAPQ6ZRS2 3230 aa28.22■■■□□ 2.11
RPUSD3-205ENST00000427174 CCDC27Q2M243 656 aa28.21■■■□□ 2.11
RPUSD3-205ENST00000427174 AMIGO3Q86WK7 504 aa28.21■■■□□ 2.11
RPUSD3-205ENST00000427174 TFCP2L1Q9NZI6 479 aa28.2■■■□□ 2.1
RPUSD3-205ENST00000427174 C4AP0C0L4 1744 aa28.19■■■□□ 2.1
RPUSD3-205ENST00000427174 CYP19A1P11511 503 aaPredicted RBP28.19■■■□□ 2.1
RPUSD3-205ENST00000427174 CHL1O00533 1208 aa28.18■■■□□ 2.1
RPUSD3-205ENST00000427174 AK7Q96M32 723 aa28.18■■■□□ 2.1
RPUSD3-205ENST00000427174 LRP5O75197 1615 aa28.18■■■□□ 2.1
RPUSD3-205ENST00000427174 CRKLP46109 303 aaKnown RBP28.17■■■□□ 2.1
RPUSD3-205ENST00000427174 SENP3-EIF4A1A0A087X0R7 540 aa28.16■■■□□ 2.1
RPUSD3-205ENST00000427174 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
RPUSD3-205ENST00000427174 EIF4A1P60842 406 aaKnown RBP28.16■■■□□ 2.1
RPUSD3-205ENST00000427174 INTS5Q6P9B9 1019 aaKnown RBP28.16■■■□□ 2.1
RPUSD3-205ENST00000427174 WWC1Q8IX03 1113 aa28.15■■■□□ 2.1
RPUSD3-205ENST00000427174 TEX13AQ9BXU3 409 aaPredicted RBP28.15■■■□□ 2.1
RPUSD3-205ENST00000427174 TSPYL4Q9UJ04 414 aa28.15■■■□□ 2.1
RPUSD3-205ENST00000427174 GNPATO15228 680 aa28.14■■■□□ 2.1
RPUSD3-205ENST00000427174 SSFA2P28290 1259 aa28.14■■■□□ 2.1
RPUSD3-205ENST00000427174 COL23A1Q86Y22 540 aaPredicted RBP28.14■■■□□ 2.1
RPUSD3-205ENST00000427174 CFAP44Q96MT7 982 aa28.14■■■□□ 2.1
RPUSD3-205ENST00000427174 PRAMEF22A3QJZ6 481 aa28.13■■■□□ 2.09
RPUSD3-205ENST00000427174 RPS6KA4O75676 772 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms