RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 POLR3DP05423 398 aaPredicted RBP21■□□□□ 0.95
ARHGEF28-203ENST00000426542 JAKMIP3Q5VZ66 844 aa21■□□□□ 0.95
ARHGEF28-203ENST00000426542 HECW1Q76N89 1606 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 GBP2P32456 591 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 DHX37Q8IY37 1157 aaKnown RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 RAB11FIP3O75154 756 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 HSP90AB3PQ58FF7 597 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF397Q8NF99 534 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 GOLGA6L7A0A1B0GV03 622 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 SYCE3A1L190 88 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 FERMT3Q86UX7 667 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 ARHGAP29Q52LW3 1261 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 CAVIN4Q5BKX8 364 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 DAPK1P53355 1430 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC102AQ96A19 550 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 GLRX3O76003 335 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 MKNK2Q9HBH9 465 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF287Q9HBT7 754 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC148Q8NFR7 591 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 IFIT1P09914 478 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 EZRP15311 586 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 USHBP1Q8N6Y0 703 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 PPP1R12BO60237 982 aaPredicted RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TNIP1Q15025 636 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 ZPR1O75312 459 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TAF3Q5VWG9 929 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 POTEJP0CG39 1038 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 NAPBQ9H115 298 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 ANKIB1Q9P2G1 1089 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 KLHL10Q6JEL2 608 aa20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 SUPT6HQ7KZ85 1726 aaKnown RBP20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 WAPLQ7Z5K2 1190 aa20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 POGZQ7Z3K3 1410 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 SPA17Q15506 151 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 DZIP1Q86YF9 867 aaKnown RBP20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 TSG101Q99816 390 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 UBA5Q9GZZ9 404 aa20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 TRIM21P19474 475 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 FKBP15Q5T1M5 1219 aa20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 RANBP6O60518 1105 aaKnown RBP20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 CHMP4BP1P59074 171 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 SCLT1Q96NL6 688 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC82Q8N4S0 544 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 UBXN4Q92575 508 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 MAP3K12Q12852 859 aa20.89■□□□□ 0.94
ARHGEF28-203ENST00000426542 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC196A0A1B0GTZ2 297 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC96Q2M329 555 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 CTCFLQ8NI51 663 aaPredicted RBP20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 F6X3S4 739 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SLC5A1P13866 664 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SFPQP23246 707 aaKnown RBP eCLIP20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC183Q5T5S1 534 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CACNA2D4Q7Z3S7 1137 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ESPNB1AK53 854 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CASQ1P31415 396 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZNF213O14771 459 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CETN2P41208 172 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SSRP1Q08945 709 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SH2B1Q9NRF2 756 aaPredicted RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 MPRIPQ6WCQ1 1025 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 TRMT112Q9UI30 125 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 RARSP54136 660 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 NME9Q86XW9 330 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 ERICH4A6NGS2 130 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZSCAN12O43309 604 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 HMGB1P09429 215 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 AMOTQ4VCS5 1084 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms