RNA–Protein interactions for RNA: ENST00000425888.1

WDR53-202, Transcript of WD repeat domain 53, humanhuman

TSL 2

Gene WDR53, Length 980 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR53-202ENST00000425888 ITPK1Q13572 414 aa19.5■□□□□ 0.71
WDR53-202ENST00000425888 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
WDR53-202ENST00000425888 AK7Q96M32 723 aa19.5■□□□□ 0.71
WDR53-202ENST00000425888 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
WDR53-202ENST00000425888 LGR6Q9HBX8 967 aa19.5■□□□□ 0.71
WDR53-202ENST00000425888 SMIM5Q71RC9 77 aa19.48■□□□□ 0.71
WDR53-202ENST00000425888 ARXQ96QS3 562 aa19.48■□□□□ 0.71
WDR53-202ENST00000425888 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
WDR53-202ENST00000425888 PHF14O94880 888 aa19.47■□□□□ 0.71
WDR53-202ENST00000425888 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
WDR53-202ENST00000425888 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
WDR53-202ENST00000425888 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
WDR53-202ENST00000425888 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
WDR53-202ENST00000425888 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
WDR53-202ENST00000425888 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
WDR53-202ENST00000425888 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
WDR53-202ENST00000425888 POLD1P28340 1107 aa19.46■□□□□ 0.71
WDR53-202ENST00000425888 SCN11AQ9UI33 1791 aa19.45■□□□□ 0.7
WDR53-202ENST00000425888 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
WDR53-202ENST00000425888 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
WDR53-202ENST00000425888 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
WDR53-202ENST00000425888 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
WDR53-202ENST00000425888 PRKAR2BP31323 418 aa19.44■□□□□ 0.7
WDR53-202ENST00000425888 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
WDR53-202ENST00000425888 SYT17Q9BSW7 474 aa19.44■□□□□ 0.7
WDR53-202ENST00000425888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.43■□□□□ 0.7
WDR53-202ENST00000425888 GNPATO15228 680 aa19.43■□□□□ 0.7
WDR53-202ENST00000425888 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
WDR53-202ENST00000425888 RSPH6AQ9H0K4 717 aa19.43■□□□□ 0.7
WDR53-202ENST00000425888 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
WDR53-202ENST00000425888 PHACTR3Q96KR7 559 aa19.42■□□□□ 0.7
WDR53-202ENST00000425888 SSFA2P28290 1259 aa19.41■□□□□ 0.7
WDR53-202ENST00000425888 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
WDR53-202ENST00000425888 UBR3Q6ZT12 1888 aa19.41■□□□□ 0.7
WDR53-202ENST00000425888 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
WDR53-202ENST00000425888 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
WDR53-202ENST00000425888 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
WDR53-202ENST00000425888 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
WDR53-202ENST00000425888 VIRMAQ69YN4 1812 aaKnown RBP19.39■□□□□ 0.69
WDR53-202ENST00000425888 FCHSD2O94868 740 aa19.38■□□□□ 0.69
WDR53-202ENST00000425888 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
WDR53-202ENST00000425888 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
WDR53-202ENST00000425888 MRC1P22897 1456 aa19.37■□□□□ 0.69
WDR53-202ENST00000425888 RC3H1Q5TC82 1133 aaKnown RBP19.37■□□□□ 0.69
WDR53-202ENST00000425888 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
WDR53-202ENST00000425888 TEFQ10587 303 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 RALBP1Q15311 655 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
WDR53-202ENST00000425888 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
WDR53-202ENST00000425888 CRKLP46109 303 aaKnown RBP19.35■□□□□ 0.69
WDR53-202ENST00000425888 DNAJC10Q8IXB1 793 aa19.35■□□□□ 0.69
WDR53-202ENST00000425888 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
WDR53-202ENST00000425888 ARHGEF1Q92888 912 aaKnown RBP19.34■□□□□ 0.69
WDR53-202ENST00000425888 TJP1Q07157 1748 aa19.32■□□□□ 0.68
WDR53-202ENST00000425888 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
WDR53-202ENST00000425888 NLGN2Q8NFZ4 835 aa19.32■□□□□ 0.68
WDR53-202ENST00000425888 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
WDR53-202ENST00000425888 RFC4P35249 363 aa19.31■□□□□ 0.68
WDR53-202ENST00000425888 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
WDR53-202ENST00000425888 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 NEFMP07197 916 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 ADRA2BP18089 450 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
WDR53-202ENST00000425888 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 MCM10Q7L590 875 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 CEMIPQ8WUJ3 1361 aa19.3■□□□□ 0.68
WDR53-202ENST00000425888 CYP19A1P11511 503 aaPredicted RBP19.29■□□□□ 0.68
WDR53-202ENST00000425888 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
WDR53-202ENST00000425888 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
WDR53-202ENST00000425888 ZNF496Q96IT1 587 aaPredicted RBP19.28■□□□□ 0.68
WDR53-202ENST00000425888 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
WDR53-202ENST00000425888 CICQ96RK0 1608 aaPredicted RBP19.27■□□□□ 0.68
WDR53-202ENST00000425888 BTBD11A6QL63 1104 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 KCNQ3O43525 872 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 MMP10P09238 476 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 GPR162Q16538 588 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 VSIG10Q8N0Z9 540 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 PLEKHF1Q96S99 279 aa19.27■□□□□ 0.68
WDR53-202ENST00000425888 GYS1P13807 737 aa19.26■□□□□ 0.67
WDR53-202ENST00000425888 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
WDR53-202ENST00000425888 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
WDR53-202ENST00000425888 CD2APQ9Y5K6 639 aa19.26■□□□□ 0.67
WDR53-202ENST00000425888 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
WDR53-202ENST00000425888 UBR2Q8IWV8 1755 aa19.25■□□□□ 0.67
WDR53-202ENST00000425888 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
WDR53-202ENST00000425888 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
WDR53-202ENST00000425888 YY1P25490 414 aa19.24■□□□□ 0.67
WDR53-202ENST00000425888 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
WDR53-202ENST00000425888 PNNQ9H307 717 aaKnown RBP19.24■□□□□ 0.67
WDR53-202ENST00000425888 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
WDR53-202ENST00000425888 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
WDR53-202ENST00000425888 C4AP0C0L4 1744 aa19.23■□□□□ 0.67
WDR53-202ENST00000425888 STARD3NLO95772 234 aa19.23■□□□□ 0.67
WDR53-202ENST00000425888 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
WDR53-202ENST00000425888 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms