RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
SMIM27-201ENST00000425533 TIAM2Q8IVF5 1701 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 SIK1P57059 783 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 TMF1P82094 1093 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 ITPK1Q13572 414 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
SMIM27-201ENST00000425533 NLGN1Q8N2Q7 840 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 PIGBQ92521 554 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
SMIM27-201ENST00000425533 AMPHP49418 695 aa13.64□□□□□ -0.23
SMIM27-201ENST00000425533 MLLT1Q03111 559 aaPredicted RBP13.64□□□□□ -0.23
SMIM27-201ENST00000425533 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
SMIM27-201ENST00000425533 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
SMIM27-201ENST00000425533 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
SMIM27-201ENST00000425533 GLTPD2A6NH11 291 aa13.63□□□□□ -0.23
SMIM27-201ENST00000425533 CYP27B1O15528 508 aa13.63□□□□□ -0.23
SMIM27-201ENST00000425533 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
SMIM27-201ENST00000425533 FBLN1P23142 703 aa13.63□□□□□ -0.23
SMIM27-201ENST00000425533 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
SMIM27-201ENST00000425533 ATP6V1AP38606 617 aa13.62□□□□□ -0.23
SMIM27-201ENST00000425533 RASSF7Q02833 373 aa13.62□□□□□ -0.23
SMIM27-201ENST00000425533 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
SMIM27-201ENST00000425533 HDGFL2Q7Z4V5 671 aaPredicted RBP13.62□□□□□ -0.23
SMIM27-201ENST00000425533 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
SMIM27-201ENST00000425533 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 GYS1P13807 737 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 LBX1P52954 281 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 AIDAQ96BJ3 306 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SMIM27-201ENST00000425533 CNTNAP1P78357 1384 aa13.6□□□□□ -0.23
SMIM27-201ENST00000425533 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
SMIM27-201ENST00000425533 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
SMIM27-201ENST00000425533 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
SMIM27-201ENST00000425533 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
SMIM27-201ENST00000425533 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
SMIM27-201ENST00000425533 POTECB2RU33 542 aa13.59□□□□□ -0.23
SMIM27-201ENST00000425533 CHRNA5P30532 468 aa13.59□□□□□ -0.23
SMIM27-201ENST00000425533 RGS19P49795 217 aa13.59□□□□□ -0.23
SMIM27-201ENST00000425533 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
SMIM27-201ENST00000425533 ASAP1Q9ULH1 1129 aa13.59□□□□□ -0.23
SMIM27-201ENST00000425533 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
SMIM27-201ENST00000425533 LMNB1P20700 586 aa13.58□□□□□ -0.24
SMIM27-201ENST00000425533 COG3Q96JB2 828 aa13.57□□□□□ -0.24
SMIM27-201ENST00000425533 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
SMIM27-201ENST00000425533 TERF2IPQ9NYB0 399 aa13.57□□□□□ -0.24
SMIM27-201ENST00000425533 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 ADRA2BP18089 450 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 RFC4P35249 363 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
SMIM27-201ENST00000425533 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
SMIM27-201ENST00000425533 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
SMIM27-201ENST00000425533 KDRP35968 1356 aa13.56□□□□□ -0.24
SMIM27-201ENST00000425533 HSPA8P11142 646 aaKnown RBP13.55□□□□□ -0.24
SMIM27-201ENST00000425533 VEGFBP49765 207 aa13.55□□□□□ -0.24
SMIM27-201ENST00000425533 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
SMIM27-201ENST00000425533 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
SMIM27-201ENST00000425533 POTEJP0CG39 1038 aa13.54□□□□□ -0.24
SMIM27-201ENST00000425533 DDR1Q08345 913 aa13.54□□□□□ -0.24
SMIM27-201ENST00000425533 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
SMIM27-201ENST00000425533 TNRC18O15417 2968 aaPredicted RBP13.53□□□□□ -0.24
SMIM27-201ENST00000425533 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
SMIM27-201ENST00000425533 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.24
SMIM27-201ENST00000425533 RPS6KA4O75676 772 aa13.52□□□□□ -0.25
SMIM27-201ENST00000425533 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
SMIM27-201ENST00000425533 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
SMIM27-201ENST00000425533 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
SMIM27-201ENST00000425533 INSRP06213 1382 aa13.51□□□□□ -0.25
SMIM27-201ENST00000425533 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
SMIM27-201ENST00000425533 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
SMIM27-201ENST00000425533 FKBP8Q14318 412 aa13.51□□□□□ -0.25
SMIM27-201ENST00000425533 HSP90AB2PQ58FF8 381 aa13.51□□□□□ -0.25
SMIM27-201ENST00000425533 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
SMIM27-201ENST00000425533 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
SMIM27-201ENST00000425533 USP42Q9H9J4 1324 aaKnown RBP13.49□□□□□ -0.25
SMIM27-201ENST00000425533 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
SMIM27-201ENST00000425533 NFKBIEO00221 500 aa13.49□□□□□ -0.25
SMIM27-201ENST00000425533 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
SMIM27-201ENST00000425533 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
SMIM27-201ENST00000425533 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
SMIM27-201ENST00000425533 TMEM88BA6NKF7 163 aa13.48□□□□□ -0.25
SMIM27-201ENST00000425533 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
SMIM27-201ENST00000425533 FLT4P35916 1363 aa13.47□□□□□ -0.25
SMIM27-201ENST00000425533 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
SMIM27-201ENST00000425533 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
SMIM27-201ENST00000425533 PHKG2P15735 406 aa13.46□□□□□ -0.25
SMIM27-201ENST00000425533 TM4SF1P30408 202 aa13.46□□□□□ -0.25
SMIM27-201ENST00000425533 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
SMIM27-201ENST00000425533 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
SMIM27-201ENST00000425533 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
SMIM27-201ENST00000425533 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
SMIM27-201ENST00000425533 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
SMIM27-201ENST00000425533 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
SMIM27-201ENST00000425533 SCN4AP35499 1836 aa13.44□□□□□ -0.26
SMIM27-201ENST00000425533 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms