RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L12C9JPN9 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L21D6R901 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 SEC13P55735 322 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 SLC27A3Q5K4L6 730 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
HDAC9-209ENST00000425071 SPATA31C2B4DYI2 1134 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 SMTNP53814 917 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 MTFR1Q15390 333 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-209ENST00000425071 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 NBPF15Q8N660 670 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-209ENST00000425071 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
HDAC9-209ENST00000425071 CDK2AP1O14519 115 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 DKK1O94907 266 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 TLR1Q15399 786 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-209ENST00000425071 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-209ENST00000425071 FHDC1Q9C0D6 1143 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-209ENST00000425071 ZNF358Q9NW07 568 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
HDAC9-209ENST00000425071 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-209ENST00000425071 A6NJY4 79 aa7.51□□□□□ -1.21
HDAC9-209ENST00000425071 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
HDAC9-209ENST00000425071 GNASQ5JWF2 1037 aa7.51□□□□□ -1.21
HDAC9-209ENST00000425071 PPARGC1BQ86YN6 1023 aaKnown RBP7.51□□□□□ -1.21
HDAC9-209ENST00000425071 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC9-209ENST00000425071 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
HDAC9-209ENST00000425071 POTECB2RU33 542 aa7.5□□□□□ -1.21
HDAC9-209ENST00000425071 DPYDQ12882 1025 aa7.5□□□□□ -1.21
HDAC9-209ENST00000425071 TMEM214Q6NUQ4 689 aaKnown RBP7.5□□□□□ -1.21
HDAC9-209ENST00000425071 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
HDAC9-209ENST00000425071 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
HDAC9-209ENST00000425071 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
HDAC9-209ENST00000425071 FIGNL2A6NMB9 653 aa7.49□□□□□ -1.21
HDAC9-209ENST00000425071 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
HDAC9-209ENST00000425071 TAS1R3Q7RTX0 852 aa7.49□□□□□ -1.21
HDAC9-209ENST00000425071 ARXQ96QS3 562 aa7.49□□□□□ -1.21
HDAC9-209ENST00000425071 NIFKQ9BYG3 293 aaKnown RBP7.49□□□□□ -1.21
HDAC9-209ENST00000425071 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-209ENST00000425071 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
HDAC9-209ENST00000425071 NOVA2Q9UNW9 492 aaKnown RBP7.49□□□□□ -1.21
HDAC9-209ENST00000425071 EPHA4P54764 986 aa7.48□□□□□ -1.21
HDAC9-209ENST00000425071 CDCA8Q53HL2 280 aa7.48□□□□□ -1.21
HDAC9-209ENST00000425071 PRICKLE2Q7Z3G6 844 aa7.48□□□□□ -1.21
HDAC9-209ENST00000425071 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
HDAC9-209ENST00000425071 SFI1A8K8P3 1242 aa7.47□□□□□ -1.21
HDAC9-209ENST00000425071 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
HDAC9-209ENST00000425071 FOXK2Q01167 660 aa7.47□□□□□ -1.21
HDAC9-209ENST00000425071 PDE4CQ08493 712 aa7.47□□□□□ -1.21
HDAC9-209ENST00000425071 NBPF10Q6P3W6 841 aaKnown RBP7.47□□□□□ -1.21
HDAC9-209ENST00000425071 DYRK1BQ9Y463 629 aa7.47□□□□□ -1.21
HDAC9-209ENST00000425071 PTSQ03393 145 aa7.46□□□□□ -1.22
HDAC9-209ENST00000425071 POU4F2Q12837 409 aa7.46□□□□□ -1.22
HDAC9-209ENST00000425071 STAG2Q8N3U4 1231 aa7.46□□□□□ -1.22
HDAC9-209ENST00000425071 ARID3AQ99856 593 aa7.46□□□□□ -1.22
HDAC9-209ENST00000425071 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-209ENST00000425071 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
HDAC9-209ENST00000425071 SLC35F4A4IF30 521 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 TEAD4Q15561 434 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 C1orf216Q8TAB5 229 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 GMCL1Q96IK5 515 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 HINFPQ9BQA5 517 aa7.45□□□□□ -1.22
HDAC9-209ENST00000425071 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
HDAC9-209ENST00000425071 A0A1B0GTH6 734 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 SOBPA7XYQ1 873 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
HDAC9-209ENST00000425071 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 SLC9A9Q8IVB4 645 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 TSEN2Q8NCE0 465 aaKnown RBP7.44□□□□□ -1.22
HDAC9-209ENST00000425071 TIMMDC1Q9NPL8 285 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
HDAC9-209ENST00000425071 IGFBP4P22692 258 aa7.43□□□□□ -1.22
HDAC9-209ENST00000425071 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
HDAC9-209ENST00000425071 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
HDAC9-209ENST00000425071 ATAD2Q6PL18 1390 aa7.43□□□□□ -1.22
HDAC9-209ENST00000425071 SENP3-EIF4A1A0A087X0R7 540 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 F11P03951 625 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 RHOQP17081 205 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 HIRAP54198 1017 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-209ENST00000425071 LBRQ14739 615 aaKnown RBP7.42□□□□□ -1.22
HDAC9-209ENST00000425071 POTEAQ6S8J7 498 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
HDAC9-209ENST00000425071 SLC16A10Q8TF71 515 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms