RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 NBR1Q14596 966 aa10.41□□□□□ -0.74
SCN2A-204ENST00000424833 TAF7Q15545 349 aaPredicted RBP10.41□□□□□ -0.74
SCN2A-204ENST00000424833 HSPA2P54652 639 aa10.4□□□□□ -0.74
SCN2A-204ENST00000424833 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
SCN2A-204ENST00000424833 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
SCN2A-204ENST00000424833 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.74
SCN2A-204ENST00000424833 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.74
SCN2A-204ENST00000424833 SIPA1L3O60292 1781 aaPredicted RBP10.4□□□□□ -0.74
SCN2A-204ENST00000424833 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.75
SCN2A-204ENST00000424833 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.75
SCN2A-204ENST00000424833 DCTPP1Q9H773 170 aa10.4□□□□□ -0.75
SCN2A-204ENST00000424833 LMTK3Q96Q04 1460 aa10.39□□□□□ -0.75
SCN2A-204ENST00000424833 STRCQ7RTU9 1775 aa10.39□□□□□ -0.75
SCN2A-204ENST00000424833 CACNA1FO60840 1977 aa10.39□□□□□ -0.75
SCN2A-204ENST00000424833 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
SCN2A-204ENST00000424833 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
SCN2A-204ENST00000424833 KCNQ3O43525 872 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 FLIIQ13045 1269 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 BMP2KLQ5H9B9 411 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 ERBB3P21860 1342 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 SOS1Q07889 1333 aaPredicted RBP10.38□□□□□ -0.75
SCN2A-204ENST00000424833 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 PXDNLA1KZ92 1463 aa10.38□□□□□ -0.75
SCN2A-204ENST00000424833 EIF4A1P60842 406 aaKnown RBP10.37□□□□□ -0.75
SCN2A-204ENST00000424833 AKAP4Q5JQC9 854 aa10.37□□□□□ -0.75
SCN2A-204ENST00000424833 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
SCN2A-204ENST00000424833 ZNF530Q6P9A1 599 aaPredicted RBP10.37□□□□□ -0.75
SCN2A-204ENST00000424833 ATF3P18847 181 aa10.37□□□□□ -0.75
SCN2A-204ENST00000424833 MPRIPQ6WCQ1 1025 aa10.37□□□□□ -0.75
SCN2A-204ENST00000424833 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
SCN2A-204ENST00000424833 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
SCN2A-204ENST00000424833 TNS3Q68CZ2 1445 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 GSPT1P15170 499 aaKnown RBP10.36□□□□□ -0.75
SCN2A-204ENST00000424833 CCT4P50991 539 aaKnown RBP10.36□□□□□ -0.75
SCN2A-204ENST00000424833 MFAP1P55081 439 aaKnown RBP10.36□□□□□ -0.75
SCN2A-204ENST00000424833 SLC4A10Q6U841 1118 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 OTUD7AQ8TE49 926 aaPredicted RBP10.36□□□□□ -0.75
SCN2A-204ENST00000424833 UBE2Q2Q8WVN8 375 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 MEGF6O75095 1541 aa10.36□□□□□ -0.75
SCN2A-204ENST00000424833 RNMTO43148 476 aaKnown RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 ZC3H6P61129 1189 aaKnown RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 PLEKHO1Q53GL0 409 aaPredicted RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
SCN2A-204ENST00000424833 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 HEG1Q9ULI3 1381 aa10.35□□□□□ -0.75
SCN2A-204ENST00000424833 ABCC6O95255 1503 aa10.35□□□□□ -0.75
SCN2A-204ENST00000424833 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 AMOTQ4VCS5 1084 aa10.35□□□□□ -0.75
SCN2A-204ENST00000424833 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
SCN2A-204ENST00000424833 PHAXQ9H814 394 aaKnown RBP10.35□□□□□ -0.75
SCN2A-204ENST00000424833 C22orf23Q9BZE7 217 aa10.34□□□□□ -0.75
SCN2A-204ENST00000424833 UPF2Q9HAU5 1272 aaKnown RBP10.34□□□□□ -0.75
SCN2A-204ENST00000424833 KDM6AO15550 1401 aaPredicted RBP10.34□□□□□ -0.75
SCN2A-204ENST00000424833 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
SCN2A-204ENST00000424833 SMARCA5O60264 1052 aaPredicted RBP10.33□□□□□ -0.76
SCN2A-204ENST00000424833 HOXB7P09629 217 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 NPHP3Q7Z494 1330 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 TUBGCP6Q96RT7 1819 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 PKD1L3Q7Z443 1732 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
SCN2A-204ENST00000424833 C5P01031 1676 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 ADCY9O60503 1353 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 PNMA6EA0A0J9YXQ4 647 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 BTBD11A6QL63 1104 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 RBM25P49756 843 aaKnown RBP10.32□□□□□ -0.76
SCN2A-204ENST00000424833 TEFQ10587 303 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 C1orf141Q5JVX7 400 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 TTC22Q5TAA0 569 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
SCN2A-204ENST00000424833 CPDO75976 1380 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 ANXA1P04083 346 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 GNAI2P04899 355 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 EIF2S2P20042 333 aaKnown RBP10.31□□□□□ -0.76
SCN2A-204ENST00000424833 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 MRC1P22897 1456 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 ABCA3Q99758 1704 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 SALL3Q9BXA9 1300 aa10.31□□□□□ -0.76
SCN2A-204ENST00000424833 APBB1O00213 710 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
SCN2A-204ENST00000424833 CHRNA2Q15822 529 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 PROSER3Q2NL68 480 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 KIF2CQ99661 725 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 LRRFIP2Q9Y608 721 aaKnown RBP10.3□□□□□ -0.76
SCN2A-204ENST00000424833 GLI3P10071 1580 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 GNAI3P08754 354 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 NFKBIBQ15653 356 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
SCN2A-204ENST00000424833 NLRP2Q9NX02 1062 aa10.3□□□□□ -0.76
SCN2A-204ENST00000424833 ZNF335Q9H4Z2 1342 aaPredicted RBP10.29□□□□□ -0.76
SCN2A-204ENST00000424833 BECN1Q14457 450 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms