RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 TGFB2P61812 414 aa21.66■■□□□ 1.06
RPUSD3-204ENST00000424438 CARD14Q9BXL6 1004 aa21.66■■□□□ 1.06
RPUSD3-204ENST00000424438 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
RPUSD3-204ENST00000424438 KDRP35968 1356 aa21.65■■□□□ 1.06
RPUSD3-204ENST00000424438 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
RPUSD3-204ENST00000424438 GNPATO15228 680 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 PHKG2P15735 406 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 ADRA2BP18089 450 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 ITPK1Q13572 414 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 C16orf71Q8IYS4 520 aaPredicted RBP21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 KLRG1Q96E93 195 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 EYA1Q99502 592 aa21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 BRCA1P38398 1863 aaKnown RBP21.64■■□□□ 1.05
RPUSD3-204ENST00000424438 C10orf71Q711Q0 1435 aa21.63■■□□□ 1.05
RPUSD3-204ENST00000424438 PRELPP51888 382 aa21.63■■□□□ 1.05
RPUSD3-204ENST00000424438 NLGN1Q8N2Q7 840 aa21.63■■□□□ 1.05
RPUSD3-204ENST00000424438 ASAP1Q9ULH1 1129 aa21.63■■□□□ 1.05
RPUSD3-204ENST00000424438 COL5A3P25940 1745 aaPredicted RBP21.63■■□□□ 1.05
RPUSD3-204ENST00000424438 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
RPUSD3-204ENST00000424438 RC3H1Q5TC82 1133 aaKnown RBP21.62■■□□□ 1.05
RPUSD3-204ENST00000424438 MMP10P09238 476 aa21.61■■□□□ 1.05
RPUSD3-204ENST00000424438 RBM46Q8TBY0 533 aaKnown RBP21.61■■□□□ 1.05
RPUSD3-204ENST00000424438 ATG3Q9NT62 314 aa21.61■■□□□ 1.05
RPUSD3-204ENST00000424438 ARFGEF1Q9Y6D6 1849 aa21.6■■□□□ 1.05
RPUSD3-204ENST00000424438 JMYQ8N9B5 988 aa21.6■■□□□ 1.05
RPUSD3-204ENST00000424438 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
RPUSD3-204ENST00000424438 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
RPUSD3-204ENST00000424438 ERVV-2B6SEH9 535 aa21.59■■□□□ 1.05
RPUSD3-204ENST00000424438 NMRK2Q9NPI5 230 aa21.59■■□□□ 1.05
RPUSD3-204ENST00000424438 POLKQ9UBT6 870 aa21.59■■□□□ 1.05
RPUSD3-204ENST00000424438 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
RPUSD3-204ENST00000424438 CNTNAP4Q9C0A0 1308 aa21.58■■□□□ 1.05
RPUSD3-204ENST00000424438 SMIM5Q71RC9 77 aa21.58■■□□□ 1.05
RPUSD3-204ENST00000424438 HSP90AB1P08238 724 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-204ENST00000424438 TRAPPC3LQ5T215 181 aa21.57■■□□□ 1.04
RPUSD3-204ENST00000424438 FSTL1Q12841 308 aa21.56■■□□□ 1.04
RPUSD3-204ENST00000424438 BCS1LQ9Y276 419 aa21.56■■□□□ 1.04
RPUSD3-204ENST00000424438 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 HTRA3P83110 453 aa21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 ARHGAP27Q6ZUM4 889 aa21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 CCDC87Q9NVE4 849 aa21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 MYH14Q7Z406 1995 aaKnown RBP21.55■■□□□ 1.04
RPUSD3-204ENST00000424438 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
RPUSD3-204ENST00000424438 WDR90Q96KV7 1748 aa21.53■■□□□ 1.04
RPUSD3-204ENST00000424438 GYS1P13807 737 aa21.53■■□□□ 1.04
RPUSD3-204ENST00000424438 EIF4A2Q14240 407 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-204ENST00000424438 SLC4A9Q96Q91 983 aa21.53■■□□□ 1.04
RPUSD3-204ENST00000424438 ARHGEF1Q92888 912 aaKnown RBP21.52■■□□□ 1.04
RPUSD3-204ENST00000424438 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
RPUSD3-204ENST00000424438 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
RPUSD3-204ENST00000424438 AMOTQ4VCS5 1084 aa21.5■■□□□ 1.03
RPUSD3-204ENST00000424438 KDM2BQ8NHM5 1336 aa21.5■■□□□ 1.03
RPUSD3-204ENST00000424438 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-204ENST00000424438 RFC4P35249 363 aa21.49■■□□□ 1.03
RPUSD3-204ENST00000424438 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
RPUSD3-204ENST00000424438 FCHSD2O94868 740 aa21.48■■□□□ 1.03
RPUSD3-204ENST00000424438 DPEP1P16444 411 aa21.48■■□□□ 1.03
RPUSD3-204ENST00000424438 PLEKHO1Q53GL0 409 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-204ENST00000424438 KCNA3P22001 575 aa21.47■■□□□ 1.03
RPUSD3-204ENST00000424438 C9orf131Q5VYM1 1079 aa21.47■■□□□ 1.03
RPUSD3-204ENST00000424438 RBM42Q9BTD8 480 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-204ENST00000424438 TNRC6CQ9HCJ0 1690 aaKnown RBP21.45■■□□□ 1.02
RPUSD3-204ENST00000424438 ADAMTS7Q9UKP4 1686 aa21.45■■□□□ 1.02
RPUSD3-204ENST00000424438 PIM2Q9P1W9 311 aa21.45■■□□□ 1.02
RPUSD3-204ENST00000424438 SBF1O95248 1867 aa21.45■■□□□ 1.02
RPUSD3-204ENST00000424438 CABP4P57796 275 aa21.44■■□□□ 1.02
RPUSD3-204ENST00000424438 SMC1BQ8NDV3 1235 aa21.44■■□□□ 1.02
RPUSD3-204ENST00000424438 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-204ENST00000424438 TJP1Q07157 1748 aa21.43■■□□□ 1.02
RPUSD3-204ENST00000424438 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
RPUSD3-204ENST00000424438 ZC3H4Q9UPT8 1303 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-204ENST00000424438 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
RPUSD3-204ENST00000424438 HSPA1AP0DMV8 641 aaKnown RBP21.42■■□□□ 1.02
RPUSD3-204ENST00000424438 HSPA1BP0DMV9 641 aaKnown RBP21.42■■□□□ 1.02
RPUSD3-204ENST00000424438 CRKLP46109 303 aaKnown RBP21.41■■□□□ 1.02
RPUSD3-204ENST00000424438 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
RPUSD3-204ENST00000424438 PCNTO95613 3336 aa21.4■■□□□ 1.02
RPUSD3-204ENST00000424438 RRAGCQ9HB90 399 aa21.4■■□□□ 1.02
RPUSD3-204ENST00000424438 MTHFSP49914 203 aa21.39■■□□□ 1.01
RPUSD3-204ENST00000424438 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
RPUSD3-204ENST00000424438 RNF181Q9P0P0 153 aa21.39■■□□□ 1.01
RPUSD3-204ENST00000424438 KCPQ6ZWJ8 1503 aa21.39■■□□□ 1.01
RPUSD3-204ENST00000424438 NRXN2Q9P2S2 1712 aa21.38■■□□□ 1.01
RPUSD3-204ENST00000424438 DDR1Q08345 913 aa21.38■■□□□ 1.01
RPUSD3-204ENST00000424438 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
RPUSD3-204ENST00000424438 TM4SF1P30408 202 aa21.37■■□□□ 1.01
RPUSD3-204ENST00000424438 FKBP8Q14318 412 aa21.37■■□□□ 1.01
RPUSD3-204ENST00000424438 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
RPUSD3-204ENST00000424438 MRC1P22897 1456 aa21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 PTCD1O75127 700 aaKnown RBP21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 INTS5Q6P9B9 1019 aaKnown RBP21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
RPUSD3-204ENST00000424438 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-204ENST00000424438 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-204ENST00000424438 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
RPUSD3-204ENST00000424438 AKAP4Q5JQC9 854 aa21.31■■□□□ 1
RPUSD3-204ENST00000424438 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms