RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 C2orf72A6NCS6 295 aa11.81□□□□□ -0.52
CLCN3P1-201ENST00000423965 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
CLCN3P1-201ENST00000423965 WDR17Q8IZU2 1322 aa11.81□□□□□ -0.52
CLCN3P1-201ENST00000423965 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
CLCN3P1-201ENST00000423965 HTRA3P83110 453 aa11.8□□□□□ -0.52
CLCN3P1-201ENST00000423965 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
CLCN3P1-201ENST00000423965 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
CLCN3P1-201ENST00000423965 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
CLCN3P1-201ENST00000423965 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
CLCN3P1-201ENST00000423965 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
CLCN3P1-201ENST00000423965 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
CLCN3P1-201ENST00000423965 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
CLCN3P1-201ENST00000423965 USP6P35125 1406 aa11.78□□□□□ -0.52
CLCN3P1-201ENST00000423965 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
CLCN3P1-201ENST00000423965 ACEP12821 1306 aa11.78□□□□□ -0.52
CLCN3P1-201ENST00000423965 ST18O60284 1047 aa11.77□□□□□ -0.53
CLCN3P1-201ENST00000423965 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
CLCN3P1-201ENST00000423965 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.53
CLCN3P1-201ENST00000423965 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
CLCN3P1-201ENST00000423965 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
CLCN3P1-201ENST00000423965 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
CLCN3P1-201ENST00000423965 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
CLCN3P1-201ENST00000423965 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
CLCN3P1-201ENST00000423965 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
CLCN3P1-201ENST00000423965 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
CLCN3P1-201ENST00000423965 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
CLCN3P1-201ENST00000423965 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
CLCN3P1-201ENST00000423965 ITSN1Q15811 1721 aa11.73□□□□□ -0.53
CLCN3P1-201ENST00000423965 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
CLCN3P1-201ENST00000423965 TNS2Q63HR2 1409 aa11.73□□□□□ -0.53
CLCN3P1-201ENST00000423965 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
CLCN3P1-201ENST00000423965 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 WNK3Q9BYP7 1800 aa11.72□□□□□ -0.53
CLCN3P1-201ENST00000423965 CDK19Q9BWU1 502 aa11.71□□□□□ -0.53
CLCN3P1-201ENST00000423965 BTAF1O14981 1849 aa11.71□□□□□ -0.54
CLCN3P1-201ENST00000423965 PDE4AP27815 886 aa11.7□□□□□ -0.54
CLCN3P1-201ENST00000423965 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
CLCN3P1-201ENST00000423965 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
CLCN3P1-201ENST00000423965 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
CLCN3P1-201ENST00000423965 POTEMA6NI47 508 aa11.69□□□□□ -0.54
CLCN3P1-201ENST00000423965 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
CLCN3P1-201ENST00000423965 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
CLCN3P1-201ENST00000423965 COL18A1P39060 1754 aa11.69□□□□□ -0.54
CLCN3P1-201ENST00000423965 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
CLCN3P1-201ENST00000423965 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
CLCN3P1-201ENST00000423965 ABCC6O95255 1503 aa11.68□□□□□ -0.54
CLCN3P1-201ENST00000423965 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
CLCN3P1-201ENST00000423965 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 KCNQ4P56696 695 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 FOXK1P85037 733 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 DSG2Q14126 1118 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 CRISPLD2Q9H0B8 497 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 C10orf71Q711Q0 1435 aa11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
CLCN3P1-201ENST00000423965 SLIT3O75094 1523 aa11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 TUBGCP6Q96RT7 1819 aa11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 IL2RBP14784 551 aa11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 MLLT1Q03111 559 aaPredicted RBP11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
CLCN3P1-201ENST00000423965 RGS19P49795 217 aa11.65□□□□□ -0.54
CLCN3P1-201ENST00000423965 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
CLCN3P1-201ENST00000423965 CPSF1Q10570 1443 aaKnown RBP11.65□□□□□ -0.54
CLCN3P1-201ENST00000423965 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
CLCN3P1-201ENST00000423965 EMP3P54852 163 aa11.63□□□□□ -0.55
CLCN3P1-201ENST00000423965 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
CLCN3P1-201ENST00000423965 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
CLCN3P1-201ENST00000423965 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
CLCN3P1-201ENST00000423965 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
CLCN3P1-201ENST00000423965 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
CLCN3P1-201ENST00000423965 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
CLCN3P1-201ENST00000423965 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
CLCN3P1-201ENST00000423965 TGFB2P61812 414 aa11.61□□□□□ -0.55
CLCN3P1-201ENST00000423965 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
CLCN3P1-201ENST00000423965 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
CLCN3P1-201ENST00000423965 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
CLCN3P1-201ENST00000423965 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 CTCFP49711 727 aaPredicted RBP11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 ABHD8Q96I13 439 aa11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 STAC3Q96MF2 364 aa11.6□□□□□ -0.55
CLCN3P1-201ENST00000423965 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
CLCN3P1-201ENST00000423965 FOXN1O15353 648 aa11.59□□□□□ -0.55
CLCN3P1-201ENST00000423965 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
CLCN3P1-201ENST00000423965 BCS1LQ9Y276 419 aa11.59□□□□□ -0.55
CLCN3P1-201ENST00000423965 LY75O60449 1722 aa11.58□□□□□ -0.56
CLCN3P1-201ENST00000423965 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
CLCN3P1-201ENST00000423965 RGPD5Q99666 1765 aa11.58□□□□□ -0.56
CLCN3P1-201ENST00000423965 ERBB3P21860 1342 aa11.58□□□□□ -0.56
CLCN3P1-201ENST00000423965 USP47Q96K76 1375 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms