RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CABP4P57796 275 aa14.64□□□□□ -0.07
USP49-204ENST00000423567 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
USP49-204ENST00000423567 LRRC4BQ9NT99 713 aa14.64□□□□□ -0.07
USP49-204ENST00000423567 U2AF1L5P0DN76 240 aaPredicted RBP14.62□□□□□ -0.07
USP49-204ENST00000423567 KCNQ4P56696 695 aa14.62□□□□□ -0.07
USP49-204ENST00000423567 U2AF1Q01081 240 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP49-204ENST00000423567 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
USP49-204ENST00000423567 MTHFSDQ2M296 383 aaKnown RBP14.61□□□□□ -0.07
USP49-204ENST00000423567 GAS2L2Q8NHY3 880 aa14.61□□□□□ -0.07
USP49-204ENST00000423567 SPON1Q9HCB6 807 aa14.61□□□□□ -0.07
USP49-204ENST00000423567 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
USP49-204ENST00000423567 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
USP49-204ENST00000423567 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
USP49-204ENST00000423567 PRKAR2BP31323 418 aa14.6□□□□□ -0.07
USP49-204ENST00000423567 LOC102724428A0A0B4J2F2 783 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 FCHSD2O94868 740 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 NEFMP07197 916 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 SIK1P57059 783 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 LRP5O75197 1615 aa14.59□□□□□ -0.07
USP49-204ENST00000423567 LY75O60449 1722 aa14.58□□□□□ -0.07
USP49-204ENST00000423567 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 ZBTB7AO95365 584 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 NFATC2IPQ8NCF5 419 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 RSPH6AQ9H0K4 717 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 ATG3Q9NT62 314 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
USP49-204ENST00000423567 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
USP49-204ENST00000423567 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
USP49-204ENST00000423567 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
USP49-204ENST00000423567 ATP6V1AP38606 617 aa14.57□□□□□ -0.08
USP49-204ENST00000423567 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
USP49-204ENST00000423567 ITGB4P16144 1822 aa14.57□□□□□ -0.08
USP49-204ENST00000423567 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
USP49-204ENST00000423567 AK7Q96M32 723 aa14.56□□□□□ -0.08
USP49-204ENST00000423567 PDGFDQ9GZP0 370 aaPredicted RBP14.56□□□□□ -0.08
USP49-204ENST00000423567 MTFR1LQ9H019 292 aa14.56□□□□□ -0.08
USP49-204ENST00000423567 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
USP49-204ENST00000423567 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
USP49-204ENST00000423567 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
USP49-204ENST00000423567 FLAD1Q8NFF5 587 aa14.55□□□□□ -0.08
USP49-204ENST00000423567 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
USP49-204ENST00000423567 LGR6Q9HBX8 967 aa14.55□□□□□ -0.08
USP49-204ENST00000423567 TEFQ10587 303 aa14.54□□□□□ -0.08
USP49-204ENST00000423567 PHACTR3Q96KR7 559 aa14.54□□□□□ -0.08
USP49-204ENST00000423567 PNPLA7Q6ZV29 1317 aa14.54□□□□□ -0.08
USP49-204ENST00000423567 RTF1Q92541 710 aaKnown RBP14.53□□□□□ -0.08
USP49-204ENST00000423567 CASZ1Q86V15 1759 aa14.52□□□□□ -0.08
USP49-204ENST00000423567 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
USP49-204ENST00000423567 PTCD1O75127 700 aaKnown RBP14.52□□□□□ -0.09
USP49-204ENST00000423567 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
USP49-204ENST00000423567 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.09
USP49-204ENST00000423567 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.09
USP49-204ENST00000423567 POLD1P28340 1107 aa14.51□□□□□ -0.09
USP49-204ENST00000423567 ITPK1Q13572 414 aa14.51□□□□□ -0.09
USP49-204ENST00000423567 POTEHQ6S545 545 aa14.51□□□□□ -0.09
USP49-204ENST00000423567 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
USP49-204ENST00000423567 C5P01031 1676 aa14.51□□□□□ -0.09
USP49-204ENST00000423567 MRC1P22897 1456 aa14.5□□□□□ -0.09
USP49-204ENST00000423567 GNPATO15228 680 aa14.5□□□□□ -0.09
USP49-204ENST00000423567 PHF14O94880 888 aa14.5□□□□□ -0.09
USP49-204ENST00000423567 COL23A1Q86Y22 540 aaPredicted RBP14.5□□□□□ -0.09
USP49-204ENST00000423567 SCN11AQ9UI33 1791 aa14.5□□□□□ -0.09
USP49-204ENST00000423567 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
USP49-204ENST00000423567 SSFA2P28290 1259 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 PTGER2P43116 358 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
USP49-204ENST00000423567 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 SLC4A9Q96Q91 983 aa14.49□□□□□ -0.09
USP49-204ENST00000423567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
USP49-204ENST00000423567 SLC39A6Q13433 755 aa14.48□□□□□ -0.09
USP49-204ENST00000423567 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
USP49-204ENST00000423567 RTCBQ9Y3I0 505 aaKnown RBP14.48□□□□□ -0.09
USP49-204ENST00000423567 CNTNAP4Q9C0A0 1308 aa14.47□□□□□ -0.09
USP49-204ENST00000423567 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
USP49-204ENST00000423567 ARXQ96QS3 562 aa14.47□□□□□ -0.09
USP49-204ENST00000423567 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
USP49-204ENST00000423567 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
USP49-204ENST00000423567 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
USP49-204ENST00000423567 MCM10Q7L590 875 aa14.46□□□□□ -0.09
USP49-204ENST00000423567 PLEKHF1Q96S99 279 aa14.46□□□□□ -0.09
USP49-204ENST00000423567 ADAMTS7Q9UKP4 1686 aa14.46□□□□□ -0.1
USP49-204ENST00000423567 TAF1LQ8IZX4 1826 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 NFE2L2Q16236 605 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 ZNF831Q5JPB2 1677 aa14.45□□□□□ -0.1
USP49-204ENST00000423567 ANP32CO43423 234 aa14.44□□□□□ -0.1
USP49-204ENST00000423567 RPS6KA4O75676 772 aa14.44□□□□□ -0.1
USP49-204ENST00000423567 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
USP49-204ENST00000423567 MSL1Q68DK7 614 aa14.44□□□□□ -0.1
USP49-204ENST00000423567 DNAJC10Q8IXB1 793 aa14.44□□□□□ -0.1
USP49-204ENST00000423567 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
USP49-204ENST00000423567 RFC4P35249 363 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms