RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 GLI3P10071 1580 aa11.73□□□□□ -0.53
LINC01399-201ENST00000423311 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
LINC01399-201ENST00000423311 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
LINC01399-201ENST00000423311 DDB1Q16531 1140 aa11.73□□□□□ -0.53
LINC01399-201ENST00000423311 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
LINC01399-201ENST00000423311 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
LINC01399-201ENST00000423311 TRPC5Q9UL62 973 aaPredicted RBP11.73□□□□□ -0.53
LINC01399-201ENST00000423311 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
LINC01399-201ENST00000423311 BTBD11A6QL63 1104 aa11.72□□□□□ -0.53
LINC01399-201ENST00000423311 VAMP4O75379 141 aa11.72□□□□□ -0.53
LINC01399-201ENST00000423311 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
LINC01399-201ENST00000423311 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
LINC01399-201ENST00000423311 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
LINC01399-201ENST00000423311 DDX54Q8TDD1 881 aaKnown RBP11.72□□□□□ -0.53
LINC01399-201ENST00000423311 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
LINC01399-201ENST00000423311 HOXB7P09629 217 aa11.71□□□□□ -0.53
LINC01399-201ENST00000423311 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
LINC01399-201ENST00000423311 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
LINC01399-201ENST00000423311 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
LINC01399-201ENST00000423311 MIS18AQ9NYP9 233 aa11.71□□□□□ -0.53
LINC01399-201ENST00000423311 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
LINC01399-201ENST00000423311 CABP4P57796 275 aa11.7□□□□□ -0.54
LINC01399-201ENST00000423311 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
LINC01399-201ENST00000423311 NFATC2IPQ8NCF5 419 aa11.7□□□□□ -0.54
LINC01399-201ENST00000423311 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
LINC01399-201ENST00000423311 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
LINC01399-201ENST00000423311 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
LINC01399-201ENST00000423311 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
LINC01399-201ENST00000423311 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
LINC01399-201ENST00000423311 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
LINC01399-201ENST00000423311 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
LINC01399-201ENST00000423311 BCAR3O75815 825 aa11.68□□□□□ -0.54
LINC01399-201ENST00000423311 SSH1Q8WYL5 1049 aa11.68□□□□□ -0.54
LINC01399-201ENST00000423311 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
LINC01399-201ENST00000423311 SMC4Q9NTJ3 1288 aa11.68□□□□□ -0.54
LINC01399-201ENST00000423311 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
LINC01399-201ENST00000423311 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
LINC01399-201ENST00000423311 ELL2O00472 640 aaPredicted RBP11.67□□□□□ -0.54
LINC01399-201ENST00000423311 MS4A1P11836 297 aa11.67□□□□□ -0.54
LINC01399-201ENST00000423311 PDE3AQ14432 1141 aa11.67□□□□□ -0.54
LINC01399-201ENST00000423311 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
LINC01399-201ENST00000423311 BCL9O00512 1426 aa11.67□□□□□ -0.54
LINC01399-201ENST00000423311 C5P01031 1676 aa11.66□□□□□ -0.54
LINC01399-201ENST00000423311 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
LINC01399-201ENST00000423311 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
LINC01399-201ENST00000423311 CCDC30Q5VVM6 783 aa11.66□□□□□ -0.54
LINC01399-201ENST00000423311 TTC5Q8N0Z6 440 aa11.66□□□□□ -0.54
LINC01399-201ENST00000423311 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
LINC01399-201ENST00000423311 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
LINC01399-201ENST00000423311 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
LINC01399-201ENST00000423311 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
LINC01399-201ENST00000423311 ZKSCAN2Q63HK3 967 aa11.65□□□□□ -0.54
LINC01399-201ENST00000423311 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
LINC01399-201ENST00000423311 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
LINC01399-201ENST00000423311 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.55
LINC01399-201ENST00000423311 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.55
LINC01399-201ENST00000423311 KCNQ3O43525 872 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 FKBP8Q14318 412 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 BCL2L13Q9BXK5 485 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 ZNF831Q5JPB2 1677 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 NHSQ6T4R5 1651 aa11.64□□□□□ -0.55
LINC01399-201ENST00000423311 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
LINC01399-201ENST00000423311 PTPRCP08575 1304 aa11.63□□□□□ -0.55
LINC01399-201ENST00000423311 PLIN1O60240 522 aa11.63□□□□□ -0.55
LINC01399-201ENST00000423311 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
LINC01399-201ENST00000423311 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
LINC01399-201ENST00000423311 RBM6P78332 1123 aaKnown RBP11.63□□□□□ -0.55
LINC01399-201ENST00000423311 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
LINC01399-201ENST00000423311 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
LINC01399-201ENST00000423311 PIGBQ92521 554 aa11.63□□□□□ -0.55
LINC01399-201ENST00000423311 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
LINC01399-201ENST00000423311 A0A0G2JS52 829 aa11.62□□□□□ -0.55
LINC01399-201ENST00000423311 MYT1Q01538 1121 aa11.62□□□□□ -0.55
LINC01399-201ENST00000423311 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
LINC01399-201ENST00000423311 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
LINC01399-201ENST00000423311 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
LINC01399-201ENST00000423311 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
LINC01399-201ENST00000423311 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
LINC01399-201ENST00000423311 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
LINC01399-201ENST00000423311 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
LINC01399-201ENST00000423311 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
LINC01399-201ENST00000423311 AAMPQ13685 434 aa11.61□□□□□ -0.55
LINC01399-201ENST00000423311 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
LINC01399-201ENST00000423311 BTAF1O14981 1849 aa11.6□□□□□ -0.55
LINC01399-201ENST00000423311 TRIM27P14373 513 aa11.6□□□□□ -0.55
LINC01399-201ENST00000423311 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
LINC01399-201ENST00000423311 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
LINC01399-201ENST00000423311 TEX13AQ9BXU3 409 aaPredicted RBP11.6□□□□□ -0.55
LINC01399-201ENST00000423311 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
LINC01399-201ENST00000423311 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
LINC01399-201ENST00000423311 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
LINC01399-201ENST00000423311 C20orf194Q5TEA3 1177 aa11.59□□□□□ -0.55
LINC01399-201ENST00000423311 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
LINC01399-201ENST00000423311 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
LINC01399-201ENST00000423311 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
LINC01399-201ENST00000423311 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
LINC01399-201ENST00000423311 EIF2S2P20042 333 aaKnown RBP11.58□□□□□ -0.56
LINC01399-201ENST00000423311 RXRBP28702 533 aa11.58□□□□□ -0.56
LINC01399-201ENST00000423311 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms