RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 TSC1Q92574 1164 aa15.4■□□□□ 0.06
CTCFL-204ENST00000422869 CHL1O00533 1208 aa15.4■□□□□ 0.06
CTCFL-204ENST00000422869 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■■□□□ 13.2
CTCFL-204ENST00000422869 ANAPC15P60006 121 aa15.4■□□□□ 0.06
CTCFL-204ENST00000422869 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
CTCFL-204ENST00000422869 USP25Q9UHP3 1055 aa15.4■□□□□ 0.06
CTCFL-204ENST00000422869 HMMRO75330 724 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 NOLC1Q14978 699 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTCFL-204ENST00000422869 DNTTIP2Q5QJE6 756 aaKnown RBP15.39■□□□□ 0.05
CTCFL-204ENST00000422869 FAM184AQ8NB25 1140 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 NRKQ7Z2Y5 1582 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
CTCFL-204ENST00000422869 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
CTCFL-204ENST00000422869 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
CTCFL-204ENST00000422869 C17orf53Q8N3J3 647 aaPredicted RBP15.38■□□□□ 0.05
CTCFL-204ENST00000422869 TTC12Q9H892 705 aaPredicted RBP15.38■□□□□ 0.05
CTCFL-204ENST00000422869 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 CPS1P31327 1500 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 MCCP23508 829 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
CTCFL-204ENST00000422869 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTCFL-204ENST00000422869 CHMLP26374 656 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 UPF3BQ9BZI7 483 aaKnown RBP15.37■□□□□ 0.05
CTCFL-204ENST00000422869 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 EXOC6BQ9Y2D4 811 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
CTCFL-204ENST00000422869 SSH2Q76I76 1423 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 ADCY5O95622 1261 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
CTCFL-204ENST00000422869 MCM10Q7L590 875 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 SPTLC3Q9NUV7 552 aa15.37■□□□□ 0.05
CTCFL-204ENST00000422869 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
CTCFL-204ENST00000422869 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 SETD1AO15047 1707 aaKnown RBP15.36■□□□□ 0.05
CTCFL-204ENST00000422869 DMTNQ08495 405 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 MX1P20591 662 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
CTCFL-204ENST00000422869 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
CTCFL-204ENST00000422869 F6X3S4 739 aa15.35■□□□□ 0.05
CTCFL-204ENST00000422869 UTP14CQ5TAP6 766 aaKnown RBP15.35■□□□□ 0.05
CTCFL-204ENST00000422869 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
CTCFL-204ENST00000422869 C3P01024 1663 aa15.35■□□□□ 0.05
CTCFL-204ENST00000422869 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
CTCFL-204ENST00000422869 G2E3Q7L622 706 aa15.35■□□□□ 0.05
CTCFL-204ENST00000422869 KCNA4P22459 653 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 COG3Q96JB2 828 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 IL25Q9H293 177 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 SLC4A10Q6U841 1118 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 UNC5CLQ8IV45 518 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
CTCFL-204ENST00000422869 CRB1P82279 1406 aa15.33■□□□□ 0.05
CTCFL-204ENST00000422869 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.05
CTCFL-204ENST00000422869 RILPL2Q969X0 211 aa15.33■□□□□ 0.05
CTCFL-204ENST00000422869 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.05
CTCFL-204ENST00000422869 CNPY2Q9Y2B0 182 aa15.33■□□□□ 0.05
CTCFL-204ENST00000422869 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
CTCFL-204ENST00000422869 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.04
CTCFL-204ENST00000422869 AKAP12Q02952 1782 aa15.32■□□□□ 0.04
CTCFL-204ENST00000422869 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CTCFL-204ENST00000422869 GNAI2P04899 355 aa15.32■□□□□ 0.04
CTCFL-204ENST00000422869 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
CTCFL-204ENST00000422869 KIF3AQ9Y496 699 aa15.32■□□□□ 0.04
CTCFL-204ENST00000422869 KDM4AO75164 1064 aa15.32■□□□□ 0.04
CTCFL-204ENST00000422869 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 FUCA2Q9BTY2 467 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 STAP2Q9UGK3 403 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 HSPA4P34932 840 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 NCKAP5LQ9HCH0 1330 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
CTCFL-204ENST00000422869 AP5Z1O43299 807 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
CTCFL-204ENST00000422869 UBE2HP62256 183 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 WASLO00401 505 aaPredicted RBP15.3■□□□□ 0.04
CTCFL-204ENST00000422869 ZSCAN22P10073 491 aaPredicted RBP15.3■□□□□ 0.04
CTCFL-204ENST00000422869 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
CTCFL-204ENST00000422869 XRN1Q8IZH2 1706 aaKnown RBP15.3■□□□□ 0.04
CTCFL-204ENST00000422869 KCNF1Q9H3M0 494 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 ITSN1Q15811 1721 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 CBX1P83916 185 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
CTCFL-204ENST00000422869 RICTORQ6R327 1708 aa15.29■□□□□ 0.04
CTCFL-204ENST00000422869 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
CTCFL-204ENST00000422869 KIAA1524Q8TCG1 905 aa15.29■□□□□ 0.04
CTCFL-204ENST00000422869 EPB41L2O43491 1005 aaKnown RBP15.28■□□□□ 0.04
CTCFL-204ENST00000422869 TTC14Q96N46 770 aa15.28■□□□□ 0.04
CTCFL-204ENST00000422869 PYCARDQ9ULZ3 195 aa15.28■□□□□ 0.04
CTCFL-204ENST00000422869 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
CTCFL-204ENST00000422869 SYT1P21579 422 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms