RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 PIP4K2BP78356 416 aa19.43■□□□□ 0.7
LINC00472-202ENST00000421704 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
LINC00472-202ENST00000421704 BTG4Q9NY30 223 aa19.43■□□□□ 0.7
LINC00472-202ENST00000421704 TRIM27P14373 513 aa19.42■□□□□ 0.7
LINC00472-202ENST00000421704 MPRIPQ6WCQ1 1025 aa19.42■□□□□ 0.7
LINC00472-202ENST00000421704 THRAP3Q9Y2W1 955 aaKnown RBP19.42■□□□□ 0.7
LINC00472-202ENST00000421704 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
LINC00472-202ENST00000421704 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
LINC00472-202ENST00000421704 STRN4Q9NRL3 753 aa19.41■□□□□ 0.7
LINC00472-202ENST00000421704 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
LINC00472-202ENST00000421704 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
LINC00472-202ENST00000421704 LARP1Q6PKG0 1096 aaKnown RBP19.4■□□□□ 0.7
LINC00472-202ENST00000421704 CENPQQ7L2Z9 268 aaPredicted RBP19.4■□□□□ 0.7
LINC00472-202ENST00000421704 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
LINC00472-202ENST00000421704 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
LINC00472-202ENST00000421704 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
LINC00472-202ENST00000421704 NRAPQ86VF7 1730 aa19.39■□□□□ 0.7
LINC00472-202ENST00000421704 WNK3Q9BYP7 1800 aa19.39■□□□□ 0.7
LINC00472-202ENST00000421704 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
LINC00472-202ENST00000421704 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
LINC00472-202ENST00000421704 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
LINC00472-202ENST00000421704 KDM6AO15550 1401 aaPredicted RBP19.37■□□□□ 0.69
LINC00472-202ENST00000421704 ABCC4O15439 1325 aa19.37■□□□□ 0.69
LINC00472-202ENST00000421704 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
LINC00472-202ENST00000421704 CYP27B1O15528 508 aa19.36■□□□□ 0.69
LINC00472-202ENST00000421704 DISP2A7MBM2 1401 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 SHANK3Q9BYB0 1731 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 ITPRIPQ8IWB1 547 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 LRP6O75581 1613 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 SLIT2O94813 1529 aa19.35■□□□□ 0.69
LINC00472-202ENST00000421704 SLC4A2P04920 1241 aa19.34■□□□□ 0.69
LINC00472-202ENST00000421704 RLBP1P12271 317 aa19.34■□□□□ 0.69
LINC00472-202ENST00000421704 CABP4P57796 275 aa19.34■□□□□ 0.69
LINC00472-202ENST00000421704 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
LINC00472-202ENST00000421704 ZNF790Q6PG37 636 aa19.33■□□□□ 0.68
LINC00472-202ENST00000421704 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.68
LINC00472-202ENST00000421704 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.68
LINC00472-202ENST00000421704 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
LINC00472-202ENST00000421704 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
LINC00472-202ENST00000421704 TMEM57Q8N5G2 664 aa19.32■□□□□ 0.68
LINC00472-202ENST00000421704 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
LINC00472-202ENST00000421704 KDM2BQ8NHM5 1336 aa19.31■□□□□ 0.68
LINC00472-202ENST00000421704 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
LINC00472-202ENST00000421704 N4BP2Q86UW6 1770 aaPredicted RBP19.3■□□□□ 0.68
LINC00472-202ENST00000421704 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
LINC00472-202ENST00000421704 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
LINC00472-202ENST00000421704 TNS2Q63HR2 1409 aa19.3■□□□□ 0.68
LINC00472-202ENST00000421704 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.3■□□□□ 0.68
LINC00472-202ENST00000421704 SPATA31A1Q5TZJ5 1347 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 EXOC5O00471 708 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
LINC00472-202ENST00000421704 BARGINQ6ZT62 677 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 PAPPAQ13219 1627 aa19.29■□□□□ 0.68
LINC00472-202ENST00000421704 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
LINC00472-202ENST00000421704 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
LINC00472-202ENST00000421704 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
LINC00472-202ENST00000421704 ZBTB40Q9NUA8 1239 aa19.28■□□□□ 0.68
LINC00472-202ENST00000421704 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.68
LINC00472-202ENST00000421704 FLIIQ13045 1269 aa19.27■□□□□ 0.68
LINC00472-202ENST00000421704 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.67
LINC00472-202ENST00000421704 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 SPATA31A5Q5VU36 1347 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 SPATA31A7Q8IWB4 1347 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 ZBTB7BO15156 539 aaPredicted RBP19.26■□□□□ 0.67
LINC00472-202ENST00000421704 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
LINC00472-202ENST00000421704 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
LINC00472-202ENST00000421704 UNC5CLQ8IV45 518 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
LINC00472-202ENST00000421704 RGS12O14924 1447 aa19.25■□□□□ 0.67
LINC00472-202ENST00000421704 DDX54Q8TDD1 881 aaKnown RBP19.25■□□□□ 0.67
LINC00472-202ENST00000421704 USP35Q9P2H5 1018 aa19.25■□□□□ 0.67
LINC00472-202ENST00000421704 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
LINC00472-202ENST00000421704 FKBP5Q13451 457 aaPredicted RBP19.24■□□□□ 0.67
LINC00472-202ENST00000421704 FNBP4Q8N3X1 1017 aaPredicted RBP19.24■□□□□ 0.67
LINC00472-202ENST00000421704 DDX58O95786 925 aaKnown RBP19.23■□□□□ 0.67
LINC00472-202ENST00000421704 VPS72Q15906 364 aa19.23■□□□□ 0.67
LINC00472-202ENST00000421704 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
LINC00472-202ENST00000421704 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
LINC00472-202ENST00000421704 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
LINC00472-202ENST00000421704 IBTKQ9P2D0 1353 aaPredicted RBP19.22■□□□□ 0.67
LINC00472-202ENST00000421704 KCNQ3O43525 872 aa19.22■□□□□ 0.67
LINC00472-202ENST00000421704 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
LINC00472-202ENST00000421704 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
LINC00472-202ENST00000421704 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
LINC00472-202ENST00000421704 DDB1Q16531 1140 aa19.21■□□□□ 0.67
LINC00472-202ENST00000421704 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
LINC00472-202ENST00000421704 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
LINC00472-202ENST00000421704 GNAI3P08754 354 aa19.2■□□□□ 0.66
LINC00472-202ENST00000421704 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
LINC00472-202ENST00000421704 C5P01031 1676 aa19.2■□□□□ 0.66
LINC00472-202ENST00000421704 RPAP2Q8IXW5 612 aaPredicted RBP19.19■□□□□ 0.66
LINC00472-202ENST00000421704 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
LINC00472-202ENST00000421704 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
LINC00472-202ENST00000421704 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
LINC00472-202ENST00000421704 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
LINC00472-202ENST00000421704 BCL9LQ86UU0 1499 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms