RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 ITGB4P16144 1822 aa17.58■□□□□ 0.41
LINC00475-204ENST00000421234 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
LINC00475-204ENST00000421234 LY75O60449 1722 aa17.58■□□□□ 0.4
LINC00475-204ENST00000421234 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
LINC00475-204ENST00000421234 PROM2Q8N271 834 aa17.57■□□□□ 0.4
LINC00475-204ENST00000421234 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
LINC00475-204ENST00000421234 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
LINC00475-204ENST00000421234 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
LINC00475-204ENST00000421234 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
LINC00475-204ENST00000421234 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
LINC00475-204ENST00000421234 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
LINC00475-204ENST00000421234 PAPPAQ13219 1627 aa17.55■□□□□ 0.4
LINC00475-204ENST00000421234 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
LINC00475-204ENST00000421234 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
LINC00475-204ENST00000421234 CYP27B1O15528 508 aa17.53■□□□□ 0.4
LINC00475-204ENST00000421234 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
LINC00475-204ENST00000421234 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
LINC00475-204ENST00000421234 FAM163AQ96GL9 167 aaPredicted RBP17.52■□□□□ 0.4
LINC00475-204ENST00000421234 SLC15A2Q16348 729 aa17.51■□□□□ 0.39
LINC00475-204ENST00000421234 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
LINC00475-204ENST00000421234 LCE2DQ5TA82 110 aaPredicted RBP17.51■□□□□ 0.39
LINC00475-204ENST00000421234 SCUBE2Q9NQ36 999 aa17.51■□□□□ 0.39
LINC00475-204ENST00000421234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC00475-204ENST00000421234 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
LINC00475-204ENST00000421234 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
LINC00475-204ENST00000421234 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
LINC00475-204ENST00000421234 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
LINC00475-204ENST00000421234 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
LINC00475-204ENST00000421234 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
LINC00475-204ENST00000421234 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
LINC00475-204ENST00000421234 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
LINC00475-204ENST00000421234 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
LINC00475-204ENST00000421234 C5P01031 1676 aa17.48■□□□□ 0.39
LINC00475-204ENST00000421234 MTHFSP49914 203 aa17.48■□□□□ 0.39
LINC00475-204ENST00000421234 LRRC4BQ9NT99 713 aa17.48■□□□□ 0.39
LINC00475-204ENST00000421234 TAF1LQ8IZX4 1826 aa17.48■□□□□ 0.39
LINC00475-204ENST00000421234 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
LINC00475-204ENST00000421234 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
LINC00475-204ENST00000421234 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
LINC00475-204ENST00000421234 PHKG2P15735 406 aa17.46■□□□□ 0.39
LINC00475-204ENST00000421234 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
LINC00475-204ENST00000421234 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
LINC00475-204ENST00000421234 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
LINC00475-204ENST00000421234 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 IL13P35225 146 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 KCNQ4P56696 695 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
LINC00475-204ENST00000421234 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
LINC00475-204ENST00000421234 ZNF530Q6P9A1 599 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-204ENST00000421234 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-204ENST00000421234 PDGFDQ9GZP0 370 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-204ENST00000421234 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
LINC00475-204ENST00000421234 KDRP35968 1356 aa17.43■□□□□ 0.38
LINC00475-204ENST00000421234 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
LINC00475-204ENST00000421234 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
LINC00475-204ENST00000421234 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
LINC00475-204ENST00000421234 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
LINC00475-204ENST00000421234 PIGBQ92521 554 aa17.42■□□□□ 0.38
LINC00475-204ENST00000421234 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
LINC00475-204ENST00000421234 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
LINC00475-204ENST00000421234 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
LINC00475-204ENST00000421234 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
LINC00475-204ENST00000421234 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
LINC00475-204ENST00000421234 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
LINC00475-204ENST00000421234 HMOX1P09601 288 aa17.39■□□□□ 0.37
LINC00475-204ENST00000421234 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
LINC00475-204ENST00000421234 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
LINC00475-204ENST00000421234 ERVV-2B6SEH9 535 aa17.37■□□□□ 0.37
LINC00475-204ENST00000421234 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
LINC00475-204ENST00000421234 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
LINC00475-204ENST00000421234 PNPLA7Q6ZV29 1317 aa17.37■□□□□ 0.37
LINC00475-204ENST00000421234 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
LINC00475-204ENST00000421234 CABP4P57796 275 aa17.36■□□□□ 0.37
LINC00475-204ENST00000421234 BMP2KQ9NSY1 1161 aaPredicted RBP17.36■□□□□ 0.37
LINC00475-204ENST00000421234 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
LINC00475-204ENST00000421234 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 SIK1P57059 783 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 AK7Q96M32 723 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
LINC00475-204ENST00000421234 PTGER2P43116 358 aa17.34■□□□□ 0.37
LINC00475-204ENST00000421234 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
LINC00475-204ENST00000421234 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
LINC00475-204ENST00000421234 POLD1P28340 1107 aa17.32■□□□□ 0.36
LINC00475-204ENST00000421234 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
LINC00475-204ENST00000421234 ATP6V1AP38606 617 aa17.32■□□□□ 0.36
LINC00475-204ENST00000421234 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
LINC00475-204ENST00000421234 COL5A3P25940 1745 aaPredicted RBP17.32■□□□□ 0.36
LINC00475-204ENST00000421234 FLAD1Q8NFF5 587 aa17.31■□□□□ 0.36
LINC00475-204ENST00000421234 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
LINC00475-204ENST00000421234 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
LINC00475-204ENST00000421234 ARXQ96QS3 562 aa17.3■□□□□ 0.36
LINC00475-204ENST00000421234 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
LINC00475-204ENST00000421234 TRPC6Q9Y210 931 aa17.3■□□□□ 0.36
LINC00475-204ENST00000421234 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
LINC00475-204ENST00000421234 PHF14O94880 888 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms