RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 C1orf141Q5JVX7 400 aa24.35■■□□□ 1.49
ECHDC3-202ENST00000420401 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
ECHDC3-202ENST00000420401 DCAF5Q96JK2 942 aa24.33■■□□□ 1.49
ECHDC3-202ENST00000420401 U2AF1L5P0DN76 240 aaPredicted RBP24.32■■□□□ 1.48
ECHDC3-202ENST00000420401 U2AF1Q01081 240 aaKnown RBP eCLIP24.32■■□□□ 1.48
ECHDC3-202ENST00000420401 CCNL1Q9UK58 526 aaPredicted RBP24.32■■□□□ 1.48
ECHDC3-202ENST00000420401 IFFO2Q5TF58 517 aa24.31■■□□□ 1.48
ECHDC3-202ENST00000420401 MYBBP1AQ9BQG0 1328 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-202ENST00000420401 TMOD3Q9NYL9 352 aa24.3■■□□□ 1.48
ECHDC3-202ENST00000420401 ERVV-2B6SEH9 535 aa24.29■■□□□ 1.48
ECHDC3-202ENST00000420401 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.48
ECHDC3-202ENST00000420401 AKAP4Q5JQC9 854 aa24.29■■□□□ 1.48
ECHDC3-202ENST00000420401 MTHFSDQ2M296 383 aaKnown RBP24.28■■□□□ 1.48
ECHDC3-202ENST00000420401 PIGBQ92521 554 aa24.28■■□□□ 1.48
ECHDC3-202ENST00000420401 FCHSD2O94868 740 aa24.27■■□□□ 1.48
ECHDC3-202ENST00000420401 SMARCC1Q92922 1105 aaPredicted RBP24.27■■□□□ 1.48
ECHDC3-202ENST00000420401 RSPH6AQ9H0K4 717 aa24.27■■□□□ 1.48
ECHDC3-202ENST00000420401 PRKRIP1Q9H875 184 aaPredicted RBP24.27■■□□□ 1.48
ECHDC3-202ENST00000420401 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
ECHDC3-202ENST00000420401 COL23A1Q86Y22 540 aaPredicted RBP24.26■■□□□ 1.47
ECHDC3-202ENST00000420401 GAS2L2Q8NHY3 880 aa24.25■■□□□ 1.47
ECHDC3-202ENST00000420401 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
ECHDC3-202ENST00000420401 TOGARAM1Q9Y4F4 1720 aa24.24■■□□□ 1.47
ECHDC3-202ENST00000420401 CABP4P57796 275 aa24.24■■□□□ 1.47
ECHDC3-202ENST00000420401 MSL1Q68DK7 614 aa24.24■■□□□ 1.47
ECHDC3-202ENST00000420401 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
ECHDC3-202ENST00000420401 KDM6AO15550 1401 aaPredicted RBP24.22■■□□□ 1.47
ECHDC3-202ENST00000420401 PALLDQ8WX93 1383 aa24.22■■□□□ 1.47
ECHDC3-202ENST00000420401 C5P01031 1676 aa24.21■■□□□ 1.47
ECHDC3-202ENST00000420401 ATP10DQ9P241 1426 aa24.21■■□□□ 1.47
ECHDC3-202ENST00000420401 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
ECHDC3-202ENST00000420401 PNNQ9H307 717 aaKnown RBP24.21■■□□□ 1.47
ECHDC3-202ENST00000420401 ITGB4P16144 1822 aa24.2■■□□□ 1.46
ECHDC3-202ENST00000420401 NEFMP07197 916 aa24.2■■□□□ 1.46
ECHDC3-202ENST00000420401 GPBP1L1Q9HC44 474 aaPredicted RBP24.2■■□□□ 1.46
ECHDC3-202ENST00000420401 FLAD1Q8NFF5 587 aa24.19■■□□□ 1.46
ECHDC3-202ENST00000420401 CD2APQ9Y5K6 639 aa24.19■■□□□ 1.46
ECHDC3-202ENST00000420401 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
ECHDC3-202ENST00000420401 GNAT3A8MTJ3 354 aa24.18■■□□□ 1.46
ECHDC3-202ENST00000420401 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
ECHDC3-202ENST00000420401 NFATC2IPQ8NCF5 419 aa24.18■■□□□ 1.46
ECHDC3-202ENST00000420401 ATG3Q9NT62 314 aa24.18■■□□□ 1.46
ECHDC3-202ENST00000420401 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
ECHDC3-202ENST00000420401 LGR6Q9HBX8 967 aa24.17■■□□□ 1.46
ECHDC3-202ENST00000420401 ZNF526Q8TF50 670 aaPredicted RBP24.15■■□□□ 1.46
ECHDC3-202ENST00000420401 SLC52A2Q9HAB3 445 aa24.15■■□□□ 1.46
ECHDC3-202ENST00000420401 LOC102724428A0A0B4J2F2 783 aa24.14■■□□□ 1.45
ECHDC3-202ENST00000420401 SIK1P57059 783 aa24.14■■□□□ 1.45
ECHDC3-202ENST00000420401 ANP32CO43423 234 aa24.13■■□□□ 1.45
ECHDC3-202ENST00000420401 WDR43Q15061 677 aaKnown RBP eCLIP24.12■■□□□ 1.45
ECHDC3-202ENST00000420401 MAPK8IP3Q9UPT6 1336 aa24.11■■□□□ 1.45
ECHDC3-202ENST00000420401 RTF1Q92541 710 aaKnown RBP24.11■■□□□ 1.45
ECHDC3-202ENST00000420401 AK7Q96M32 723 aa24.11■■□□□ 1.45
ECHDC3-202ENST00000420401 PLEKHF1Q96S99 279 aa24.11■■□□□ 1.45
ECHDC3-202ENST00000420401 SCN11AQ9UI33 1791 aa24.11■■□□□ 1.45
ECHDC3-202ENST00000420401 HSPA6P17066 643 aa24.1■■□□□ 1.45
ECHDC3-202ENST00000420401 ATP6V1AP38606 617 aa24.1■■□□□ 1.45
ECHDC3-202ENST00000420401 IL17REQ8NFR9 667 aa24.1■■□□□ 1.45
ECHDC3-202ENST00000420401 HTATSF1O43719 755 aaKnown RBP24.09■■□□□ 1.45
ECHDC3-202ENST00000420401 TEFQ10587 303 aa24.09■■□□□ 1.45
ECHDC3-202ENST00000420401 RBM42Q9BTD8 480 aaKnown RBP24.09■■□□□ 1.45
ECHDC3-202ENST00000420401 C4BP0C0L5 1744 aa24.09■■□□□ 1.45
ECHDC3-202ENST00000420401 MRC1P22897 1456 aa24.08■■□□□ 1.45
ECHDC3-202ENST00000420401 WWC3Q9ULE0 1092 aa24.07■■□□□ 1.44
ECHDC3-202ENST00000420401 UBR3Q6ZT12 1888 aa24.07■■□□□ 1.44
ECHDC3-202ENST00000420401 ADCY9O60503 1353 aa24.06■■□□□ 1.44
ECHDC3-202ENST00000420401 ADAMTS7Q9UKP4 1686 aa24.06■■□□□ 1.44
ECHDC3-202ENST00000420401 PHF14O94880 888 aa24.06■■□□□ 1.44
ECHDC3-202ENST00000420401 CEMIPQ8WUJ3 1361 aa24.05■■□□□ 1.44
ECHDC3-202ENST00000420401 PTCD1O75127 700 aaKnown RBP24.05■■□□□ 1.44
ECHDC3-202ENST00000420401 NFE2L2Q16236 605 aa24.05■■□□□ 1.44
ECHDC3-202ENST00000420401 ITPK1Q13572 414 aa24.04■■□□□ 1.44
ECHDC3-202ENST00000420401 MCM10Q7L590 875 aa24.03■■□□□ 1.44
ECHDC3-202ENST00000420401 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
ECHDC3-202ENST00000420401 ADAMTS8Q9UP79 889 aa24.03■■□□□ 1.44
ECHDC3-202ENST00000420401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.02■■□□□ 1.44
ECHDC3-202ENST00000420401 SLC39A6Q13433 755 aa24.02■■□□□ 1.44
ECHDC3-202ENST00000420401 TTC5Q8N0Z6 440 aa24.02■■□□□ 1.44
ECHDC3-202ENST00000420401 SLC4A9Q96Q91 983 aa24.02■■□□□ 1.44
ECHDC3-202ENST00000420401 RUNDC1Q96C34 613 aa24■■□□□ 1.43
ECHDC3-202ENST00000420401 BTBD11A6QL63 1104 aa23.99■■□□□ 1.43
ECHDC3-202ENST00000420401 DCTN1Q14203 1278 aa23.99■■□□□ 1.43
ECHDC3-202ENST00000420401 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
ECHDC3-202ENST00000420401 CCDC146Q8IYE0 955 aa23.99■■□□□ 1.43
ECHDC3-202ENST00000420401 SSFA2P28290 1259 aa23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 RIPK4P57078 832 aa23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 ZNF790Q6PG37 636 aa23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 ZNF831Q5JPB2 1677 aa23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 VIRMAQ69YN4 1812 aaKnown RBP23.98■■□□□ 1.43
ECHDC3-202ENST00000420401 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
ECHDC3-202ENST00000420401 VSIG10Q8N0Z9 540 aa23.97■■□□□ 1.43
ECHDC3-202ENST00000420401 GNPATO15228 680 aa23.96■■□□□ 1.43
ECHDC3-202ENST00000420401 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-202ENST00000420401 LMOD3Q0VAK6 560 aa23.96■■□□□ 1.43
ECHDC3-202ENST00000420401 CNTNAP4Q9C0A0 1308 aa23.95■■□□□ 1.42
ECHDC3-202ENST00000420401 TAF7Q15545 349 aaPredicted RBP23.95■■□□□ 1.42
ECHDC3-202ENST00000420401 CCDC184Q52MB2 194 aa23.95■■□□□ 1.42
ECHDC3-202ENST00000420401 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
ECHDC3-202ENST00000420401 KIF3CO14782 793 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms