RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 CRB1P82279 1406 aa13.26□□□□□ -0.29
PHF3-203ENST00000420043 MCM10Q7L590 875 aa13.26□□□□□ -0.29
PHF3-203ENST00000420043 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
PHF3-203ENST00000420043 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
PHF3-203ENST00000420043 SMC4Q9NTJ3 1288 aa13.26□□□□□ -0.29
PHF3-203ENST00000420043 GNAT3A8MTJ3 354 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 MS4A1P11836 297 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
PHF3-203ENST00000420043 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
PHF3-203ENST00000420043 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 DDB1Q16531 1140 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 PTF1AQ7RTS3 328 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
PHF3-203ENST00000420043 ERBB3P21860 1342 aa13.23□□□□□ -0.29
PHF3-203ENST00000420043 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
PHF3-203ENST00000420043 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
PHF3-203ENST00000420043 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
PHF3-203ENST00000420043 ABCC6O95255 1503 aa13.23□□□□□ -0.29
PHF3-203ENST00000420043 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
PHF3-203ENST00000420043 IPO8O15397 1037 aaKnown RBP13.22□□□□□ -0.29
PHF3-203ENST00000420043 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
PHF3-203ENST00000420043 CHL1O00533 1208 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
PHF3-203ENST00000420043 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
PHF3-203ENST00000420043 FTSJ3Q8IY81 847 aaKnown RBP13.21□□□□□ -0.29
PHF3-203ENST00000420043 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
PHF3-203ENST00000420043 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 RAPGEF4Q8WZA2 1011 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 COL18A1P39060 1754 aa13.21□□□□□ -0.29
PHF3-203ENST00000420043 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
PHF3-203ENST00000420043 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
PHF3-203ENST00000420043 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
PHF3-203ENST00000420043 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
PHF3-203ENST00000420043 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
PHF3-203ENST00000420043 VAMP4O75379 141 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 LRP5O75197 1615 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
PHF3-203ENST00000420043 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
PHF3-203ENST00000420043 EXOC5O00471 708 aa13.18□□□□□ -0.3
PHF3-203ENST00000420043 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
PHF3-203ENST00000420043 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
PHF3-203ENST00000420043 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
PHF3-203ENST00000420043 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
PHF3-203ENST00000420043 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
PHF3-203ENST00000420043 ABCB7O75027 752 aa13.17□□□□□ -0.3
PHF3-203ENST00000420043 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
PHF3-203ENST00000420043 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
PHF3-203ENST00000420043 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
PHF3-203ENST00000420043 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
PHF3-203ENST00000420043 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
PHF3-203ENST00000420043 LRRC37A3O60309 1634 aa13.17□□□□□ -0.3
PHF3-203ENST00000420043 TEFQ10587 303 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 AAMPQ13685 434 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 PROM2Q8N271 834 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
PHF3-203ENST00000420043 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
PHF3-203ENST00000420043 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
PHF3-203ENST00000420043 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.3
PHF3-203ENST00000420043 PLSCR1O15162 318 aa13.15□□□□□ -0.3
PHF3-203ENST00000420043 KCNQ2O43526 872 aa13.15□□□□□ -0.3
PHF3-203ENST00000420043 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
PHF3-203ENST00000420043 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
PHF3-203ENST00000420043 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
PHF3-203ENST00000420043 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
PHF3-203ENST00000420043 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
PHF3-203ENST00000420043 TRIM27P14373 513 aa13.14□□□□□ -0.31
PHF3-203ENST00000420043 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
PHF3-203ENST00000420043 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
PHF3-203ENST00000420043 RREB1Q92766 1687 aa13.14□□□□□ -0.31
PHF3-203ENST00000420043 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
PHF3-203ENST00000420043 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
PHF3-203ENST00000420043 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
PHF3-203ENST00000420043 RLBP1P12271 317 aa13.13□□□□□ -0.31
PHF3-203ENST00000420043 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
PHF3-203ENST00000420043 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
PHF3-203ENST00000420043 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
PHF3-203ENST00000420043 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
PHF3-203ENST00000420043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHF3-203ENST00000420043 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
PHF3-203ENST00000420043 CEMIPQ8WUJ3 1361 aa13.12□□□□□ -0.31
PHF3-203ENST00000420043 KRT24Q2M2I5 525 aa13.12□□□□□ -0.31
PHF3-203ENST00000420043 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
PHF3-203ENST00000420043 CHMP4BQ9H444 224 aaKnown RBP13.12□□□□□ -0.31
PHF3-203ENST00000420043 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
PHF3-203ENST00000420043 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
PHF3-203ENST00000420043 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 IL2RBP14784 551 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms