RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 ZNF445P59923 1031 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 FLIIQ13045 1269 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
USP8-203ENST00000419830 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
USP8-203ENST00000419830 AMPHP49418 695 aa11.27□□□□□ -0.6
USP8-203ENST00000419830 GPT2Q8TD30 523 aa11.27□□□□□ -0.6
USP8-203ENST00000419830 PALD1Q9ULE6 856 aa11.27□□□□□ -0.6
USP8-203ENST00000419830 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
USP8-203ENST00000419830 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.61
USP8-203ENST00000419830 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
USP8-203ENST00000419830 ZSCAN23Q3MJ62 389 aa11.27□□□□□ -0.61
USP8-203ENST00000419830 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
USP8-203ENST00000419830 STK31Q9BXU1 1019 aa11.27□□□□□ -0.61
USP8-203ENST00000419830 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
USP8-203ENST00000419830 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
USP8-203ENST00000419830 PIK3C2AO00443 1686 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 LRRC37A3O60309 1634 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
USP8-203ENST00000419830 MX1P20591 662 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 CHMLP26374 656 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 NEK4P51957 841 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
USP8-203ENST00000419830 NWD1Q149M9 1564 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 CCDC30Q5VVM6 783 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
USP8-203ENST00000419830 NGDNQ8NEJ9 315 aaKnown RBP11.26□□□□□ -0.61
USP8-203ENST00000419830 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 GNAI3P08754 354 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
USP8-203ENST00000419830 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 HOXC9P31274 260 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 TBX22Q9Y458 520 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
USP8-203ENST00000419830 PRKCSHP14314 528 aaPredicted RBP11.25□□□□□ -0.61
USP8-203ENST00000419830 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
USP8-203ENST00000419830 IL17RAQ96F46 866 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 RBSNQ9H1K0 784 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 IL25Q9H293 177 aa11.25□□□□□ -0.61
USP8-203ENST00000419830 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
USP8-203ENST00000419830 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
USP8-203ENST00000419830 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
USP8-203ENST00000419830 NLRP6P59044 892 aa11.24□□□□□ -0.61
USP8-203ENST00000419830 CUL4AQ13619 759 aa11.24□□□□□ -0.61
USP8-203ENST00000419830 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
USP8-203ENST00000419830 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
USP8-203ENST00000419830 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
USP8-203ENST00000419830 NUTM2GQ5VZR2 741 aa11.24□□□□□ -0.61
USP8-203ENST00000419830 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
USP8-203ENST00000419830 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
USP8-203ENST00000419830 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
USP8-203ENST00000419830 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
USP8-203ENST00000419830 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
USP8-203ENST00000419830 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
USP8-203ENST00000419830 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
USP8-203ENST00000419830 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
USP8-203ENST00000419830 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
USP8-203ENST00000419830 BRD1O95696 1058 aa11.22□□□□□ -0.61
USP8-203ENST00000419830 ANAPC15P60006 121 aa11.22□□□□□ -0.61
USP8-203ENST00000419830 SLIT1O75093 1534 aa11.22□□□□□ -0.61
USP8-203ENST00000419830 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
USP8-203ENST00000419830 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 MCM2P49736 904 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 POLA2Q14181 598 aa11.21□□□□□ -0.61
USP8-203ENST00000419830 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.62
USP8-203ENST00000419830 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 LTV1Q96GA3 475 aaPredicted RBP11.2□□□□□ -0.62
USP8-203ENST00000419830 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
USP8-203ENST00000419830 PDLIM2Q96JY6 352 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 AOX1Q06278 1338 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 UBTFL1P0CB47 393 aaPredicted RBP11.2□□□□□ -0.62
USP8-203ENST00000419830 ZSCAN30Q86W11 494 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
USP8-203ENST00000419830 PXDNLA1KZ92 1463 aa11.2□□□□□ -0.62
USP8-203ENST00000419830 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
USP8-203ENST00000419830 PI4K2BQ8TCG2 481 aa11.19□□□□□ -0.62
USP8-203ENST00000419830 CEMIPQ8WUJ3 1361 aa11.19□□□□□ -0.62
USP8-203ENST00000419830 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
USP8-203ENST00000419830 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
USP8-203ENST00000419830 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
USP8-203ENST00000419830 KCNA6P17658 529 aa11.18□□□□□ -0.62
USP8-203ENST00000419830 MCCP23508 829 aa11.18□□□□□ -0.62
USP8-203ENST00000419830 HSPA4P34932 840 aa11.18□□□□□ -0.62
USP8-203ENST00000419830 LRSAM1Q6UWE0 723 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms