RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 ATP6V1AP38606 617 aa27.43■■□□□ 1.98
HLCS-203ENST00000419461 CABP4P57796 275 aa27.43■■□□□ 1.98
HLCS-203ENST00000419461 MSL1Q68DK7 614 aa27.43■■□□□ 1.98
HLCS-203ENST00000419461 COL24A1Q17RW2 1714 aa27.42■■□□□ 1.98
HLCS-203ENST00000419461 NFATC2IPQ8NCF5 419 aa27.41■■□□□ 1.98
HLCS-203ENST00000419461 AK7Q96M32 723 aa27.41■■□□□ 1.98
HLCS-203ENST00000419461 LGR6Q9HBX8 967 aa27.41■■□□□ 1.98
HLCS-203ENST00000419461 MTHFSDQ2M296 383 aaKnown RBP27.4■■□□□ 1.98
HLCS-203ENST00000419461 PHF14O94880 888 aa27.39■■□□□ 1.98
HLCS-203ENST00000419461 AKAP4Q5JQC9 854 aa27.39■■□□□ 1.98
HLCS-203ENST00000419461 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
HLCS-203ENST00000419461 U2SURPO15042 1029 aaKnown RBP27.38■■□□□ 1.97
HLCS-203ENST00000419461 POLD1P28340 1107 aa27.38■■□□□ 1.97
HLCS-203ENST00000419461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.37■■□□□ 1.97
HLCS-203ENST00000419461 PPP2R1AP30153 589 aa27.37■■□□□ 1.97
HLCS-203ENST00000419461 FLAD1Q8NFF5 587 aa27.35■■□□□ 1.97
HLCS-203ENST00000419461 UBR3Q6ZT12 1888 aa27.35■■□□□ 1.97
HLCS-203ENST00000419461 MAP3K5Q99683 1374 aa27.35■■□□□ 1.97
HLCS-203ENST00000419461 GNPATO15228 680 aa27.34■■□□□ 1.97
HLCS-203ENST00000419461 RNMTO43148 476 aaKnown RBP27.34■■□□□ 1.97
HLCS-203ENST00000419461 KLHL34Q8N239 644 aa27.34■■□□□ 1.97
HLCS-203ENST00000419461 PTCD1O75127 700 aaKnown RBP27.33■■□□□ 1.97
HLCS-203ENST00000419461 HMGB2P26583 209 aaKnown RBP27.33■■□□□ 1.97
HLCS-203ENST00000419461 SCN11AQ9UI33 1791 aa27.32■■□□□ 1.96
HLCS-203ENST00000419461 SSFA2P28290 1259 aa27.31■■□□□ 1.96
HLCS-203ENST00000419461 NLGN2Q8NFZ4 835 aa27.31■■□□□ 1.96
HLCS-203ENST00000419461 SLC52A2Q9HAB3 445 aa27.31■■□□□ 1.96
HLCS-203ENST00000419461 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
HLCS-203ENST00000419461 SLC39A6Q13433 755 aa27.28■■□□□ 1.96
HLCS-203ENST00000419461 DCAF8L1A6NGE4 600 aa27.27■■□□□ 1.96
HLCS-203ENST00000419461 CFAP53Q96M91 514 aa27.27■■□□□ 1.96
HLCS-203ENST00000419461 RSPH6AQ9H0K4 717 aa27.27■■□□□ 1.96
HLCS-203ENST00000419461 ZNF831Q5JPB2 1677 aa27.27■■□□□ 1.96
HLCS-203ENST00000419461 UTRNP46939 3433 aa27.26■■□□□ 1.96
HLCS-203ENST00000419461 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
HLCS-203ENST00000419461 MRC1P22897 1456 aa27.25■■□□□ 1.95
HLCS-203ENST00000419461 ADAMTS7Q9UKP4 1686 aa27.25■■□□□ 1.95
HLCS-203ENST00000419461 IL17REQ8NFR9 667 aa27.25■■□□□ 1.95
HLCS-203ENST00000419461 CNTNAP4Q9C0A0 1308 aa27.24■■□□□ 1.95
HLCS-203ENST00000419461 PRKAR2BP31323 418 aa27.24■■□□□ 1.95
HLCS-203ENST00000419461 COL5A3P25940 1745 aaPredicted RBP27.24■■□□□ 1.95
HLCS-203ENST00000419461 MYH14Q7Z406 1995 aaKnown RBP27.24■■□□□ 1.95
HLCS-203ENST00000419461 YY1P25490 414 aa27.23■■□□□ 1.95
HLCS-203ENST00000419461 RTCBQ9Y3I0 505 aaKnown RBP27.23■■□□□ 1.95
HLCS-203ENST00000419461 RPS6KA4O75676 772 aa27.22■■□□□ 1.95
HLCS-203ENST00000419461 CRKLP46109 303 aaKnown RBP27.22■■□□□ 1.95
HLCS-203ENST00000419461 TRAPPC3LQ5T215 181 aa27.22■■□□□ 1.95
HLCS-203ENST00000419461 ARHGEF1Q92888 912 aaKnown RBP27.22■■□□□ 1.95
HLCS-203ENST00000419461 U2AF1L5P0DN76 240 aaPredicted RBP27.21■■□□□ 1.95
HLCS-203ENST00000419461 U2AF1Q01081 240 aaKnown RBP eCLIP27.21■■□□□ 1.95
HLCS-203ENST00000419461 DNAJC10Q8IXB1 793 aa27.21■■□□□ 1.95
HLCS-203ENST00000419461 TJP1Q07157 1748 aa27.21■■□□□ 1.95
HLCS-203ENST00000419461 GAS2L2Q8NHY3 880 aa27.2■■□□□ 1.94
HLCS-203ENST00000419461 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
HLCS-203ENST00000419461 VIRMAQ69YN4 1812 aaKnown RBP27.2■■□□□ 1.94
HLCS-203ENST00000419461 GNAT3A8MTJ3 354 aa27.19■■□□□ 1.94
HLCS-203ENST00000419461 INTS5Q6P9B9 1019 aaKnown RBP27.19■■□□□ 1.94
HLCS-203ENST00000419461 KCPQ6ZWJ8 1503 aa27.18■■□□□ 1.94
HLCS-203ENST00000419461 GPR162Q16538 588 aa27.17■■□□□ 1.94
HLCS-203ENST00000419461 DDX10Q13206 875 aaKnown RBP27.16■■□□□ 1.94
HLCS-203ENST00000419461 PELP1Q8IZL8 1130 aaKnown RBP27.16■■□□□ 1.94
HLCS-203ENST00000419461 CD2APQ9Y5K6 639 aa27.16■■□□□ 1.94
HLCS-203ENST00000419461 GOLGB1Q14789 3259 aaKnown RBP27.16■■□□□ 1.94
HLCS-203ENST00000419461 MMP10P09238 476 aa27.15■■□□□ 1.94
HLCS-203ENST00000419461 GYS1P13807 737 aa27.15■■□□□ 1.94
HLCS-203ENST00000419461 ADRA2BP18089 450 aa27.15■■□□□ 1.94
HLCS-203ENST00000419461 FCHSD2O94868 740 aa27.14■■□□□ 1.94
HLCS-203ENST00000419461 CYP19A1P11511 503 aaPredicted RBP27.14■■□□□ 1.94
HLCS-203ENST00000419461 YBX3P16989 372 aaKnown RBP eCLIP27.14■■□□□ 1.94
HLCS-203ENST00000419461 SRP68Q9UHB9 627 aaKnown RBP27.14■■□□□ 1.94
HLCS-203ENST00000419461 CICQ96RK0 1608 aaPredicted RBP27.14■■□□□ 1.94
HLCS-203ENST00000419461 RFC4P35249 363 aa27.13■■□□□ 1.93
HLCS-203ENST00000419461 CEMIPQ8WUJ3 1361 aa27.12■■□□□ 1.93
HLCS-203ENST00000419461 CCDC87Q9NVE4 849 aa27.12■■□□□ 1.93
HLCS-203ENST00000419461 KCNQ3O43525 872 aa27.11■■□□□ 1.93
HLCS-203ENST00000419461 TEFQ10587 303 aa27.11■■□□□ 1.93
HLCS-203ENST00000419461 NLGN1Q8N2Q7 840 aa27.1■■□□□ 1.93
HLCS-203ENST00000419461 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
HLCS-203ENST00000419461 MCM10Q7L590 875 aa27.09■■□□□ 1.93
HLCS-203ENST00000419461 C4AP0C0L4 1744 aa27.09■■□□□ 1.93
HLCS-203ENST00000419461 DCTN1Q14203 1278 aa27.08■■□□□ 1.93
HLCS-203ENST00000419461 ZNF790Q6PG37 636 aa27.08■■□□□ 1.93
HLCS-203ENST00000419461 VSIG10Q8N0Z9 540 aa27.08■■□□□ 1.93
HLCS-203ENST00000419461 ZBTB1Q9Y2K1 713 aa27.08■■□□□ 1.93
HLCS-203ENST00000419461 SOS1Q07889 1333 aaPredicted RBP27.08■■□□□ 1.93
HLCS-203ENST00000419461 SIPA1L3O60292 1781 aaPredicted RBP27.07■■□□□ 1.92
HLCS-203ENST00000419461 UBR2Q8IWV8 1755 aa27.07■■□□□ 1.92
HLCS-203ENST00000419461 FKBP8Q14318 412 aa27.07■■□□□ 1.92
HLCS-203ENST00000419461 WWC3Q9ULE0 1092 aa27.07■■□□□ 1.92
HLCS-203ENST00000419461 USP42Q9H9J4 1324 aaKnown RBP27.07■■□□□ 1.92
HLCS-203ENST00000419461 TTC5Q8N0Z6 440 aa27.06■■□□□ 1.92
HLCS-203ENST00000419461 PLEKHF1Q96S99 279 aa27.04■■□□□ 1.92
HLCS-203ENST00000419461 BTBD11A6QL63 1104 aa27.03■■□□□ 1.92
HLCS-203ENST00000419461 DDR1Q08345 913 aa27.03■■□□□ 1.92
HLCS-203ENST00000419461 HEG1Q9ULI3 1381 aa27.03■■□□□ 1.92
HLCS-203ENST00000419461 RALBP1Q15311 655 aa27.02■■□□□ 1.92
HLCS-203ENST00000419461 USPL1Q5W0Q7 1092 aa27.02■■□□□ 1.92
HLCS-203ENST00000419461 CANXP27824 592 aaKnown RBP27.01■■□□□ 1.91
HLCS-203ENST00000419461 RTF1Q92541 710 aaKnown RBP27■■□□□ 1.91
HLCS-203ENST00000419461 ZNF784Q8NCA9 323 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms