RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.23
LINC00642-201ENST00000419459 PDE3BQ13370 1112 aa16.52■□□□□ 0.23
LINC00642-201ENST00000419459 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.23
LINC00642-201ENST00000419459 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
LINC00642-201ENST00000419459 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
LINC00642-201ENST00000419459 E9PSI1 815 aa16.5■□□□□ 0.23
LINC00642-201ENST00000419459 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
LINC00642-201ENST00000419459 ZNF772Q68DY9 489 aaPredicted RBP16.5■□□□□ 0.23
LINC00642-201ENST00000419459 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
LINC00642-201ENST00000419459 PLEKHG2Q9H7P9 1386 aa16.5■□□□□ 0.23
LINC00642-201ENST00000419459 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
LINC00642-201ENST00000419459 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
LINC00642-201ENST00000419459 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
LINC00642-201ENST00000419459 PDE4AP27815 886 aa16.49■□□□□ 0.23
LINC00642-201ENST00000419459 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
LINC00642-201ENST00000419459 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
LINC00642-201ENST00000419459 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
LINC00642-201ENST00000419459 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
LINC00642-201ENST00000419459 TEFQ10587 303 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 DCAF5Q96JK2 942 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
LINC00642-201ENST00000419459 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
LINC00642-201ENST00000419459 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
LINC00642-201ENST00000419459 ITGB4P16144 1822 aa16.47■□□□□ 0.23
LINC00642-201ENST00000419459 POTEAQ6S8J7 498 aa16.47■□□□□ 0.23
LINC00642-201ENST00000419459 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
LINC00642-201ENST00000419459 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
LINC00642-201ENST00000419459 IL16Q14005 1332 aa16.46■□□□□ 0.23
LINC00642-201ENST00000419459 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
LINC00642-201ENST00000419459 GNAI1P63096 354 aa16.46■□□□□ 0.23
LINC00642-201ENST00000419459 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
LINC00642-201ENST00000419459 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
LINC00642-201ENST00000419459 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
LINC00642-201ENST00000419459 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
LINC00642-201ENST00000419459 KCNQ3O43525 872 aa16.45■□□□□ 0.22
LINC00642-201ENST00000419459 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
LINC00642-201ENST00000419459 SLC52A2Q9HAB3 445 aa16.45■□□□□ 0.22
LINC00642-201ENST00000419459 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
LINC00642-201ENST00000419459 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
LINC00642-201ENST00000419459 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
LINC00642-201ENST00000419459 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
LINC00642-201ENST00000419459 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
LINC00642-201ENST00000419459 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
LINC00642-201ENST00000419459 CHL1O00533 1208 aa16.44■□□□□ 0.22
LINC00642-201ENST00000419459 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
LINC00642-201ENST00000419459 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
LINC00642-201ENST00000419459 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
LINC00642-201ENST00000419459 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
LINC00642-201ENST00000419459 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
LINC00642-201ENST00000419459 CABP4P57796 275 aa16.43■□□□□ 0.22
LINC00642-201ENST00000419459 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
LINC00642-201ENST00000419459 MRC1P22897 1456 aa16.43■□□□□ 0.22
LINC00642-201ENST00000419459 RXRBP28702 533 aa16.42■□□□□ 0.22
LINC00642-201ENST00000419459 KCNQ2O43526 872 aa16.41■□□□□ 0.22
LINC00642-201ENST00000419459 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
LINC00642-201ENST00000419459 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
LINC00642-201ENST00000419459 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
LINC00642-201ENST00000419459 PTF1AQ7RTS3 328 aa16.41■□□□□ 0.22
LINC00642-201ENST00000419459 RGS12O14924 1447 aa16.4■□□□□ 0.22
LINC00642-201ENST00000419459 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
LINC00642-201ENST00000419459 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
LINC00642-201ENST00000419459 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
LINC00642-201ENST00000419459 PIGBQ92521 554 aa16.4■□□□□ 0.22
LINC00642-201ENST00000419459 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
LINC00642-201ENST00000419459 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
LINC00642-201ENST00000419459 SBF2Q86WG5 1849 aa16.38■□□□□ 0.21
LINC00642-201ENST00000419459 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
LINC00642-201ENST00000419459 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
LINC00642-201ENST00000419459 BCL9O00512 1426 aa16.37■□□□□ 0.21
LINC00642-201ENST00000419459 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
LINC00642-201ENST00000419459 KRT27Q7Z3Y8 459 aa16.37■□□□□ 0.21
LINC00642-201ENST00000419459 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
LINC00642-201ENST00000419459 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
LINC00642-201ENST00000419459 GSE1Q14687 1217 aa16.36■□□□□ 0.21
LINC00642-201ENST00000419459 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
LINC00642-201ENST00000419459 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
LINC00642-201ENST00000419459 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
LINC00642-201ENST00000419459 C5P01031 1676 aa16.36■□□□□ 0.21
LINC00642-201ENST00000419459 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
LINC00642-201ENST00000419459 BCAR3O75815 825 aa16.35■□□□□ 0.21
LINC00642-201ENST00000419459 TTC5Q8N0Z6 440 aa16.35■□□□□ 0.21
LINC00642-201ENST00000419459 VAMP4O75379 141 aa16.34■□□□□ 0.21
LINC00642-201ENST00000419459 BTAF1O14981 1849 aa16.34■□□□□ 0.21
LINC00642-201ENST00000419459 ATG3Q9NT62 314 aa16.33■□□□□ 0.21
LINC00642-201ENST00000419459 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
LINC00642-201ENST00000419459 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
LINC00642-201ENST00000419459 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
LINC00642-201ENST00000419459 PLIN1O60240 522 aa16.32■□□□□ 0.2
LINC00642-201ENST00000419459 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
LINC00642-201ENST00000419459 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
LINC00642-201ENST00000419459 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
LINC00642-201ENST00000419459 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
LINC00642-201ENST00000419459 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
LINC00642-201ENST00000419459 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
LINC00642-201ENST00000419459 TRIM37O94972 964 aa16.29■□□□□ 0.2
LINC00642-201ENST00000419459 KCNQ4P56696 695 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms