RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 C9orf131Q5VYM1 1079 aa10.95□□□□□ -0.66
NPIPB3-201ENST00000419180 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
NPIPB3-201ENST00000419180 KDM2BQ8NHM5 1336 aa10.94□□□□□ -0.66
NPIPB3-201ENST00000419180 TGFB2P61812 414 aa10.94□□□□□ -0.66
NPIPB3-201ENST00000419180 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
NPIPB3-201ENST00000419180 C4AP0C0L4 1744 aa10.94□□□□□ -0.66
NPIPB3-201ENST00000419180 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
NPIPB3-201ENST00000419180 MMP10P09238 476 aa10.93□□□□□ -0.66
NPIPB3-201ENST00000419180 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 FCHSD2O94868 740 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 HOXC9P31274 260 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 RRAGCQ9HB90 399 aa10.92□□□□□ -0.66
NPIPB3-201ENST00000419180 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 DPEP1P16444 411 aa10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
NPIPB3-201ENST00000419180 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
NPIPB3-201ENST00000419180 RTL1A6NKG5 1358 aa10.9□□□□□ -0.66
NPIPB3-201ENST00000419180 GNPATO15228 680 aa10.9□□□□□ -0.66
NPIPB3-201ENST00000419180 RNF181Q9P0P0 153 aa10.9□□□□□ -0.66
NPIPB3-201ENST00000419180 SBF1O95248 1867 aa10.89□□□□□ -0.67
NPIPB3-201ENST00000419180 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
NPIPB3-201ENST00000419180 NBPF6Q5VWK0 638 aa10.89□□□□□ -0.67
NPIPB3-201ENST00000419180 USHBP1Q8N6Y0 703 aa10.89□□□□□ -0.67
NPIPB3-201ENST00000419180 NBPF4Q96M43 638 aa10.89□□□□□ -0.67
NPIPB3-201ENST00000419180 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 SIK1P57059 783 aa10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 HDGFL2Q7Z4V5 671 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 DCAF5Q96JK2 942 aa10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
NPIPB3-201ENST00000419180 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 SMG6Q86US8 1419 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 CYP27B1O15528 508 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 KCNA3P22001 575 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 AMPHP49418 695 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 ITPK1Q13572 414 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 PIGBQ92521 554 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
NPIPB3-201ENST00000419180 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-201ENST00000419180 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
NPIPB3-201ENST00000419180 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
NPIPB3-201ENST00000419180 SLC12A5Q9H2X9 1139 aa10.86□□□□□ -0.67
NPIPB3-201ENST00000419180 COL5A3P25940 1745 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-201ENST00000419180 FOXN1O15353 648 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 FBLN1P23142 703 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 NLGN1Q8N2Q7 840 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 PRDM10Q9NQV6 1147 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 PIM2Q9P1W9 311 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 KDRP35968 1356 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
NPIPB3-201ENST00000419180 TMF1P82094 1093 aa10.84□□□□□ -0.67
NPIPB3-201ENST00000419180 DALRD3Q5D0E6 543 aaKnown RBP10.84□□□□□ -0.67
NPIPB3-201ENST00000419180 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
NPIPB3-201ENST00000419180 COG3Q96JB2 828 aa10.84□□□□□ -0.67
NPIPB3-201ENST00000419180 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
NPIPB3-201ENST00000419180 GYS1P13807 737 aa10.83□□□□□ -0.68
NPIPB3-201ENST00000419180 VEGFAP15692 232 aaPredicted RBP10.83□□□□□ -0.68
NPIPB3-201ENST00000419180 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
NPIPB3-201ENST00000419180 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.68
NPIPB3-201ENST00000419180 RASSF7Q02833 373 aa10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 RRS1Q15050 365 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 TRAPPC3LQ5T215 181 aa10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 L3MBTL2Q969R5 705 aa10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
NPIPB3-201ENST00000419180 INSRP06213 1382 aa10.81□□□□□ -0.68
NPIPB3-201ENST00000419180 GLTPD2A6NH11 291 aa10.81□□□□□ -0.68
NPIPB3-201ENST00000419180 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
NPIPB3-201ENST00000419180 TMOD3Q9NYL9 352 aa10.81□□□□□ -0.68
NPIPB3-201ENST00000419180 ASAP1Q9ULH1 1129 aa10.81□□□□□ -0.68
NPIPB3-201ENST00000419180 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
NPIPB3-201ENST00000419180 CNTNAP1P78357 1384 aa10.8□□□□□ -0.68
NPIPB3-201ENST00000419180 CHRNA5P30532 468 aa10.8□□□□□ -0.68
NPIPB3-201ENST00000419180 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
NPIPB3-201ENST00000419180 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
NPIPB3-201ENST00000419180 HMGB1P09429 215 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 LMNB1P20700 586 aa10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 DDR1Q08345 913 aa10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 ATG3Q9NT62 314 aa10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-201ENST00000419180 FLT4P35916 1363 aa10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 MYH14Q7Z406 1995 aaKnown RBP10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 POTECB2RU33 542 aa10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 RFC4P35249 363 aa10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 HSP90AB2PQ58FF8 381 aa10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 SLC4A9Q96Q91 983 aa10.78□□□□□ -0.68
NPIPB3-201ENST00000419180 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.68
NPIPB3-201ENST00000419180 CCDC88AQ3V6T2 1871 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms