RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
DDX39B-205ENST00000419020 ITPK1Q13572 414 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
DDX39B-205ENST00000419020 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 PIGBQ92521 554 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
DDX39B-205ENST00000419020 GLTPD2A6NH11 291 aa16.68■□□□□ 0.26
DDX39B-205ENST00000419020 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
DDX39B-205ENST00000419020 CREBZFQ9NS37 354 aa16.68■□□□□ 0.26
DDX39B-205ENST00000419020 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
DDX39B-205ENST00000419020 CYP27B1O15528 508 aa16.67■□□□□ 0.26
DDX39B-205ENST00000419020 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
DDX39B-205ENST00000419020 FBLN1P23142 703 aa16.66■□□□□ 0.26
DDX39B-205ENST00000419020 AMPHP49418 695 aa16.66■□□□□ 0.26
DDX39B-205ENST00000419020 LBX1P52954 281 aa16.66■□□□□ 0.26
DDX39B-205ENST00000419020 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
DDX39B-205ENST00000419020 TATP17735 454 aaPredicted RBP16.65■□□□□ 0.26
DDX39B-205ENST00000419020 RASSF7Q02833 373 aa16.65■□□□□ 0.26
DDX39B-205ENST00000419020 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
DDX39B-205ENST00000419020 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
DDX39B-205ENST00000419020 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
DDX39B-205ENST00000419020 POTECB2RU33 542 aa16.64■□□□□ 0.25
DDX39B-205ENST00000419020 GYS1P13807 737 aa16.64■□□□□ 0.25
DDX39B-205ENST00000419020 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
DDX39B-205ENST00000419020 RGS19P49795 217 aa16.64■□□□□ 0.25
DDX39B-205ENST00000419020 CNTNAP1P78357 1384 aa16.64■□□□□ 0.25
DDX39B-205ENST00000419020 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
DDX39B-205ENST00000419020 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
DDX39B-205ENST00000419020 CHRNA5P30532 468 aa16.62■□□□□ 0.25
DDX39B-205ENST00000419020 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
DDX39B-205ENST00000419020 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
DDX39B-205ENST00000419020 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
DDX39B-205ENST00000419020 ASAP1Q9ULH1 1129 aa16.62■□□□□ 0.25
DDX39B-205ENST00000419020 LMNB1P20700 586 aa16.61■□□□□ 0.25
DDX39B-205ENST00000419020 WBP1LQ9NX94 342 aa16.61■□□□□ 0.25
DDX39B-205ENST00000419020 CCDC85CA6NKD9 419 aa16.6■□□□□ 0.25
DDX39B-205ENST00000419020 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
DDX39B-205ENST00000419020 VEGFBP49765 207 aa16.59■□□□□ 0.25
DDX39B-205ENST00000419020 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
DDX39B-205ENST00000419020 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
DDX39B-205ENST00000419020 ADRA2BP18089 450 aa16.58■□□□□ 0.24
DDX39B-205ENST00000419020 RFC4P35249 363 aa16.58■□□□□ 0.24
DDX39B-205ENST00000419020 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
DDX39B-205ENST00000419020 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
DDX39B-205ENST00000419020 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
DDX39B-205ENST00000419020 COG3Q96JB2 828 aa16.57■□□□□ 0.24
DDX39B-205ENST00000419020 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
DDX39B-205ENST00000419020 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
DDX39B-205ENST00000419020 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
DDX39B-205ENST00000419020 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
DDX39B-205ENST00000419020 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
DDX39B-205ENST00000419020 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
DDX39B-205ENST00000419020 DDR1Q08345 913 aa16.56■□□□□ 0.24
DDX39B-205ENST00000419020 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
DDX39B-205ENST00000419020 KDRP35968 1356 aa16.55■□□□□ 0.24
DDX39B-205ENST00000419020 VIRMAQ69YN4 1812 aaKnown RBP16.55■□□□□ 0.24
DDX39B-205ENST00000419020 ATG3Q9NT62 314 aa16.55■□□□□ 0.24
DDX39B-205ENST00000419020 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
DDX39B-205ENST00000419020 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
DDX39B-205ENST00000419020 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
DDX39B-205ENST00000419020 RPS6KA4O75676 772 aa16.53■□□□□ 0.24
DDX39B-205ENST00000419020 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
DDX39B-205ENST00000419020 DPY19L2Q6NUT2 758 aa16.53■□□□□ 0.24
DDX39B-205ENST00000419020 PASKQ96RG2 1323 aa16.52■□□□□ 0.24
DDX39B-205ENST00000419020 FKBP8Q14318 412 aa16.52■□□□□ 0.24
DDX39B-205ENST00000419020 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
DDX39B-205ENST00000419020 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
DDX39B-205ENST00000419020 NFKBIEO00221 500 aa16.51■□□□□ 0.23
DDX39B-205ENST00000419020 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
DDX39B-205ENST00000419020 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
DDX39B-205ENST00000419020 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
DDX39B-205ENST00000419020 TMEM88BA6NKF7 163 aa16.49■□□□□ 0.23
DDX39B-205ENST00000419020 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
DDX39B-205ENST00000419020 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
DDX39B-205ENST00000419020 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
DDX39B-205ENST00000419020 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
DDX39B-205ENST00000419020 INSRP06213 1382 aa16.49■□□□□ 0.23
DDX39B-205ENST00000419020 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
DDX39B-205ENST00000419020 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
DDX39B-205ENST00000419020 USP42Q9H9J4 1324 aaKnown RBP16.47■□□□□ 0.23
DDX39B-205ENST00000419020 MAP2K1Q02750 393 aaPredicted RBP16.47■□□□□ 0.23
DDX39B-205ENST00000419020 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
DDX39B-205ENST00000419020 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
DDX39B-205ENST00000419020 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
DDX39B-205ENST00000419020 TM4SF1P30408 202 aa16.45■□□□□ 0.22
DDX39B-205ENST00000419020 ERFEQ4G0M1 354 aa16.45■□□□□ 0.22
DDX39B-205ENST00000419020 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
DDX39B-205ENST00000419020 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
DDX39B-205ENST00000419020 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
DDX39B-205ENST00000419020 PHKG2P15735 406 aa16.44■□□□□ 0.22
DDX39B-205ENST00000419020 LDHDQ86WU2 507 aa16.44■□□□□ 0.22
DDX39B-205ENST00000419020 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
DDX39B-205ENST00000419020 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
DDX39B-205ENST00000419020 FLT4P35916 1363 aa16.43■□□□□ 0.22
DDX39B-205ENST00000419020 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
DDX39B-205ENST00000419020 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms