RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 NHSQ6T4R5 1651 aa11.16□□□□□ -0.62
CNOT9-203ENST00000418808 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
CNOT9-203ENST00000418808 PIGBQ92521 554 aa11.15□□□□□ -0.62
CNOT9-203ENST00000418808 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
CNOT9-203ENST00000418808 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
CNOT9-203ENST00000418808 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.63
CNOT9-203ENST00000418808 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
CNOT9-203ENST00000418808 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
CNOT9-203ENST00000418808 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
CNOT9-203ENST00000418808 ACSBG1Q96GR2 724 aa11.14□□□□□ -0.63
CNOT9-203ENST00000418808 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
CNOT9-203ENST00000418808 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
CNOT9-203ENST00000418808 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
CNOT9-203ENST00000418808 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
CNOT9-203ENST00000418808 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 CHL1O00533 1208 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 KRT24Q2M2I5 525 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 PROM2Q8N271 834 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
CNOT9-203ENST00000418808 SLC52A2Q9HAB3 445 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 UBR2Q8IWV8 1755 aa11.13□□□□□ -0.63
CNOT9-203ENST00000418808 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 BTAF1O14981 1849 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 ASAP1Q9ULH1 1129 aa11.12□□□□□ -0.63
CNOT9-203ENST00000418808 A0A0G2JS52 829 aa11.11□□□□□ -0.63
CNOT9-203ENST00000418808 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
CNOT9-203ENST00000418808 MYT1Q01538 1121 aa11.11□□□□□ -0.63
CNOT9-203ENST00000418808 SLC39A6Q13433 755 aa11.11□□□□□ -0.63
CNOT9-203ENST00000418808 TRIM37O94972 964 aa11.1□□□□□ -0.63
CNOT9-203ENST00000418808 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
CNOT9-203ENST00000418808 SLFN5Q08AF3 891 aa11.1□□□□□ -0.63
CNOT9-203ENST00000418808 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
CNOT9-203ENST00000418808 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 BAG6P46379 1132 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 TSR2Q969E8 191 aaKnown RBP11.09□□□□□ -0.63
CNOT9-203ENST00000418808 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
CNOT9-203ENST00000418808 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 LY75O60449 1722 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 IL16Q14005 1332 aa11.09□□□□□ -0.63
CNOT9-203ENST00000418808 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.64
CNOT9-203ENST00000418808 KCNQ4P56696 695 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 ITPK1Q13572 414 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-203ENST00000418808 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 DEFB132Q7Z7B7 95 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 TSPYL6Q8N831 410 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-203ENST00000418808 TJP1Q07157 1748 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 CICQ96RK0 1608 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-203ENST00000418808 FANCIQ9NVI1 1328 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 C5P01031 1676 aa11.08□□□□□ -0.64
CNOT9-203ENST00000418808 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
CNOT9-203ENST00000418808 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
CNOT9-203ENST00000418808 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
CNOT9-203ENST00000418808 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
CNOT9-203ENST00000418808 CABP4P57796 275 aa11.06□□□□□ -0.64
CNOT9-203ENST00000418808 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
CNOT9-203ENST00000418808 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
CNOT9-203ENST00000418808 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
CNOT9-203ENST00000418808 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
CNOT9-203ENST00000418808 YTHDC1Q96MU7 727 aaKnown RBP11.05□□□□□ -0.64
CNOT9-203ENST00000418808 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
CNOT9-203ENST00000418808 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
CNOT9-203ENST00000418808 SYTL4Q96C24 671 aaPredicted RBP11.04□□□□□ -0.64
CNOT9-203ENST00000418808 LRP5O75197 1615 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
CNOT9-203ENST00000418808 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 RREB1Q92766 1687 aa11.04□□□□□ -0.64
CNOT9-203ENST00000418808 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
CNOT9-203ENST00000418808 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
CNOT9-203ENST00000418808 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 TEFQ10587 303 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 PDIA6Q15084 440 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 SMIM5Q71RC9 77 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 USP16Q9Y5T5 823 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
CNOT9-203ENST00000418808 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
CNOT9-203ENST00000418808 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
CNOT9-203ENST00000418808 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
CNOT9-203ENST00000418808 PLSCR1O15162 318 aa11.02□□□□□ -0.65
CNOT9-203ENST00000418808 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
CNOT9-203ENST00000418808 SIK1P57059 783 aa11.02□□□□□ -0.65
CNOT9-203ENST00000418808 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
CNOT9-203ENST00000418808 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
CNOT9-203ENST00000418808 EZH2Q15910 746 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms