RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
TMEM248-203ENST00000418375 DCAF5Q96JK2 942 aa17.75■□□□□ 0.43
TMEM248-203ENST00000418375 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
TMEM248-203ENST00000418375 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
TMEM248-203ENST00000418375 LY75O60449 1722 aa17.75■□□□□ 0.43
TMEM248-203ENST00000418375 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
TMEM248-203ENST00000418375 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
TMEM248-203ENST00000418375 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
TMEM248-203ENST00000418375 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
TMEM248-203ENST00000418375 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMEM248-203ENST00000418375 PIGBQ92521 554 aa17.72■□□□□ 0.43
TMEM248-203ENST00000418375 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
TMEM248-203ENST00000418375 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
TMEM248-203ENST00000418375 QSER1Q2KHR3 1735 aa17.71■□□□□ 0.43
TMEM248-203ENST00000418375 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
TMEM248-203ENST00000418375 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
TMEM248-203ENST00000418375 CABP4P57796 275 aa17.69■□□□□ 0.42
TMEM248-203ENST00000418375 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
TMEM248-203ENST00000418375 KDM6AO15550 1401 aaPredicted RBP17.69■□□□□ 0.42
TMEM248-203ENST00000418375 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
TMEM248-203ENST00000418375 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
TMEM248-203ENST00000418375 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
TMEM248-203ENST00000418375 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
TMEM248-203ENST00000418375 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
TMEM248-203ENST00000418375 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
TMEM248-203ENST00000418375 LOC102724428A0A0B4J2F2 783 aa17.66■□□□□ 0.42
TMEM248-203ENST00000418375 SIK1P57059 783 aa17.66■□□□□ 0.42
TMEM248-203ENST00000418375 AK7Q96M32 723 aa17.66■□□□□ 0.42
TMEM248-203ENST00000418375 MSL1Q68DK7 614 aa17.65■□□□□ 0.42
TMEM248-203ENST00000418375 RTF1Q92541 710 aaKnown RBP17.65■□□□□ 0.42
TMEM248-203ENST00000418375 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
TMEM248-203ENST00000418375 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
TMEM248-203ENST00000418375 C5P01031 1676 aa17.64■□□□□ 0.42
TMEM248-203ENST00000418375 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
TMEM248-203ENST00000418375 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
TMEM248-203ENST00000418375 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
TMEM248-203ENST00000418375 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
TMEM248-203ENST00000418375 ITGB4P16144 1822 aa17.63■□□□□ 0.41
TMEM248-203ENST00000418375 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
TMEM248-203ENST00000418375 NFE2L2Q16236 605 aa17.63■□□□□ 0.41
TMEM248-203ENST00000418375 GPR162Q16538 588 aa17.63■□□□□ 0.41
TMEM248-203ENST00000418375 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
TMEM248-203ENST00000418375 TEFQ10587 303 aa17.62■□□□□ 0.41
TMEM248-203ENST00000418375 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
TMEM248-203ENST00000418375 RUNDC1Q96C34 613 aa17.62■□□□□ 0.41
TMEM248-203ENST00000418375 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
TMEM248-203ENST00000418375 PHF14O94880 888 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 C4BP0C0L5 1744 aa17.61■□□□□ 0.41
TMEM248-203ENST00000418375 UTRNP46939 3433 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
TMEM248-203ENST00000418375 SSFA2P28290 1259 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 ITPK1Q13572 414 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 AMIGO3Q86WK7 504 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 CCDC146Q8IYE0 955 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
TMEM248-203ENST00000418375 MRC1P22897 1456 aa17.6■□□□□ 0.41
TMEM248-203ENST00000418375 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
TMEM248-203ENST00000418375 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
TMEM248-203ENST00000418375 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
TMEM248-203ENST00000418375 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
TMEM248-203ENST00000418375 GNPATO15228 680 aa17.58■□□□□ 0.4
TMEM248-203ENST00000418375 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
TMEM248-203ENST00000418375 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.4
TMEM248-203ENST00000418375 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
TMEM248-203ENST00000418375 RIPK4P57078 832 aa17.57■□□□□ 0.4
TMEM248-203ENST00000418375 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
TMEM248-203ENST00000418375 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
TMEM248-203ENST00000418375 MCM10Q7L590 875 aa17.57■□□□□ 0.4
TMEM248-203ENST00000418375 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
TMEM248-203ENST00000418375 DCTN1Q14203 1278 aa17.56■□□□□ 0.4
TMEM248-203ENST00000418375 ZNF784Q8NCA9 323 aaPredicted RBP17.56■□□□□ 0.4
TMEM248-203ENST00000418375 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
TMEM248-203ENST00000418375 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
TMEM248-203ENST00000418375 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
TMEM248-203ENST00000418375 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
TMEM248-203ENST00000418375 SLC4A9Q96Q91 983 aa17.54■□□□□ 0.4
TMEM248-203ENST00000418375 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
TMEM248-203ENST00000418375 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
TMEM248-203ENST00000418375 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
TMEM248-203ENST00000418375 RTCBQ9Y3I0 505 aaKnown RBP17.53■□□□□ 0.4
TMEM248-203ENST00000418375 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.4
TMEM248-203ENST00000418375 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
TMEM248-203ENST00000418375 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
TMEM248-203ENST00000418375 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
TMEM248-203ENST00000418375 APAF1O14727 1248 aa17.51■□□□□ 0.39
TMEM248-203ENST00000418375 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.392e-9■□□□□ 9.6
TMEM248-203ENST00000418375 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
TMEM248-203ENST00000418375 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
TMEM248-203ENST00000418375 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
TMEM248-203ENST00000418375 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
TMEM248-203ENST00000418375 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
TMEM248-203ENST00000418375 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
TMEM248-203ENST00000418375 GOLGB1Q14789 3259 aaKnown RBP17.49■□□□□ 0.39
TMEM248-203ENST00000418375 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
TMEM248-203ENST00000418375 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
TMEM248-203ENST00000418375 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms