RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 LGR6Q9HBX8 967 aa27.75■■■□□ 2.03
PKNOX1-202ENST00000418336 UBR3Q6ZT12 1888 aa27.73■■■□□ 2.03
PKNOX1-202ENST00000418336 PHACTR3Q96KR7 559 aa27.73■■■□□ 2.03
PKNOX1-202ENST00000418336 CFAP53Q96M91 514 aa27.73■■■□□ 2.03
PKNOX1-202ENST00000418336 CICQ96RK0 1608 aaPredicted RBP27.72■■■□□ 2.03
PKNOX1-202ENST00000418336 RNMTO43148 476 aaKnown RBP27.72■■■□□ 2.03
PKNOX1-202ENST00000418336 ZEB1P37275 1124 aaPredicted RBP27.72■■■□□ 2.03
PKNOX1-202ENST00000418336 LINC00116Q8NCU8 138 aa27.72■■■□□ 2.03
PKNOX1-202ENST00000418336 MTFR1LQ9H019 292 aa27.72■■■□□ 2.03
PKNOX1-202ENST00000418336 COL5A3P25940 1745 aaPredicted RBP27.71■■■□□ 2.03
PKNOX1-202ENST00000418336 NFATC2IPQ8NCF5 419 aa27.71■■■□□ 2.03
PKNOX1-202ENST00000418336 CABP4P57796 275 aa27.7■■■□□ 2.02
PKNOX1-202ENST00000418336 TFCP2L1Q9NZI6 479 aa27.7■■■□□ 2.02
PKNOX1-202ENST00000418336 ATF5Q9Y2D1 282 aaPredicted RBP27.7■■■□□ 2.02
PKNOX1-202ENST00000418336 COL23A1Q86Y22 540 aaPredicted RBP27.69■■■□□ 2.02
PKNOX1-202ENST00000418336 SLC52A2Q9HAB3 445 aa27.69■■■□□ 2.02
PKNOX1-202ENST00000418336 PRKAR2BP31323 418 aa27.68■■■□□ 2.02
PKNOX1-202ENST00000418336 TJP1Q07157 1748 aa27.67■■■□□ 2.02
PKNOX1-202ENST00000418336 SIPA1L3O60292 1781 aaPredicted RBP27.67■■■□□ 2.02
PKNOX1-202ENST00000418336 SLC16A10Q8TF71 515 aa27.66■■■□□ 2.02
PKNOX1-202ENST00000418336 MAP3K5Q99683 1374 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 ATP6V1AP38606 617 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 RALBP1Q15311 655 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 SMIM5Q71RC9 77 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 KCPQ6ZWJ8 1503 aa27.65■■■□□ 2.02
PKNOX1-202ENST00000418336 FCHSD2O94868 740 aa27.64■■■□□ 2.02
PKNOX1-202ENST00000418336 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.02
PKNOX1-202ENST00000418336 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.02
PKNOX1-202ENST00000418336 IL17REQ8NFR9 667 aa27.64■■■□□ 2.02
PKNOX1-202ENST00000418336 UBR2Q8IWV8 1755 aa27.63■■■□□ 2.01
PKNOX1-202ENST00000418336 CEMIPQ8WUJ3 1361 aa27.63■■■□□ 2.01
PKNOX1-202ENST00000418336 GAS2L2Q8NHY3 880 aa27.63■■■□□ 2.01
PKNOX1-202ENST00000418336 MYH14Q7Z406 1995 aaKnown RBP27.62■■■□□ 2.01
PKNOX1-202ENST00000418336 GNAT3A8MTJ3 354 aa27.6■■■□□ 2.01
PKNOX1-202ENST00000418336 PLEKHF1Q96S99 279 aa27.6■■■□□ 2.01
PKNOX1-202ENST00000418336 RBM42Q9BTD8 480 aaKnown RBP27.59■■■□□ 2.01
PKNOX1-202ENST00000418336 HMGB2P26583 209 aaKnown RBP27.58■■■□□ 2.01
PKNOX1-202ENST00000418336 AK7Q96M32 723 aa27.58■■■□□ 2.01
PKNOX1-202ENST00000418336 PTCD1O75127 700 aaKnown RBP27.57■■■□□ 2
PKNOX1-202ENST00000418336 SLC39A6Q13433 755 aa27.57■■■□□ 2
PKNOX1-202ENST00000418336 CNTNAP4Q9C0A0 1308 aa27.57■■■□□ 2
PKNOX1-202ENST00000418336 SSFA2P28290 1259 aa27.56■■■□□ 2
PKNOX1-202ENST00000418336 MYBBP1AQ9BQG0 1328 aaKnown RBP27.56■■■□□ 2
PKNOX1-202ENST00000418336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.55■■■□□ 2
PKNOX1-202ENST00000418336 RC3H1Q5TC82 1133 aaKnown RBP27.55■■■□□ 2
PKNOX1-202ENST00000418336 FLAD1Q8NFF5 587 aa27.55■■■□□ 2
PKNOX1-202ENST00000418336 PPP1R1BQ9UD71 204 aaPredicted RBP27.55■■■□□ 2
PKNOX1-202ENST00000418336 ARXQ96QS3 562 aa27.54■■■□□ 2
PKNOX1-202ENST00000418336 PRKRIP1Q9H875 184 aaPredicted RBP27.54■■■□□ 2
PKNOX1-202ENST00000418336 DLG5Q8TDM6 1919 aa27.52■■■□□ 2
PKNOX1-202ENST00000418336 GNPATO15228 680 aa27.52■■■□□ 2
PKNOX1-202ENST00000418336 PHF14O94880 888 aa27.52■■■□□ 2
PKNOX1-202ENST00000418336 FHDC1Q9C0D6 1143 aaPredicted RBP27.52■■■□□ 2
PKNOX1-202ENST00000418336 UTRNP46939 3433 aa27.51■■■□□ 2
PKNOX1-202ENST00000418336 C4AP0C0L4 1744 aa27.5■■□□□ 1.99
PKNOX1-202ENST00000418336 MSL1Q68DK7 614 aa27.5■■□□□ 1.99
PKNOX1-202ENST00000418336 SYT17Q9BSW7 474 aa27.5■■□□□ 1.99
PKNOX1-202ENST00000418336 INTS5Q6P9B9 1019 aaKnown RBP27.49■■□□□ 1.99
PKNOX1-202ENST00000418336 DNAJC10Q8IXB1 793 aa27.49■■□□□ 1.99
PKNOX1-202ENST00000418336 MSH5O43196 834 aa27.48■■□□□ 1.99
PKNOX1-202ENST00000418336 RPS6KA4O75676 772 aa27.48■■□□□ 1.99
PKNOX1-202ENST00000418336 CRKLP46109 303 aaKnown RBP27.48■■□□□ 1.99
PKNOX1-202ENST00000418336 MCM10Q7L590 875 aa27.47■■□□□ 1.99
PKNOX1-202ENST00000418336 HTATSF1O43719 755 aaKnown RBP27.46■■□□□ 1.99
PKNOX1-202ENST00000418336 CYP19A1P11511 503 aaPredicted RBP27.46■■□□□ 1.99
PKNOX1-202ENST00000418336 DCTN1Q14203 1278 aa27.46■■□□□ 1.99
PKNOX1-202ENST00000418336 ZNF790Q6PG37 636 aa27.46■■□□□ 1.99
PKNOX1-202ENST00000418336 VSIG10Q8N0Z9 540 aa27.46■■□□□ 1.99
PKNOX1-202ENST00000418336 KCNQ3O43525 872 aa27.45■■□□□ 1.98
PKNOX1-202ENST00000418336 TEFQ10587 303 aa27.45■■□□□ 1.98
PKNOX1-202ENST00000418336 ARHGEF1Q92888 912 aaKnown RBP27.45■■□□□ 1.98
PKNOX1-202ENST00000418336 ZNF496Q96IT1 587 aaPredicted RBP27.45■■□□□ 1.98
PKNOX1-202ENST00000418336 POLD1P28340 1107 aa27.44■■□□□ 1.98
PKNOX1-202ENST00000418336 RTCBQ9Y3I0 505 aaKnown RBP27.44■■□□□ 1.98
PKNOX1-202ENST00000418336 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
PKNOX1-202ENST00000418336 ADRA2BP18089 450 aa27.43■■□□□ 1.98
PKNOX1-202ENST00000418336 GOLGB1Q14789 3259 aaKnown RBP27.41■■□□□ 1.98
PKNOX1-202ENST00000418336 HEG1Q9ULI3 1381 aa27.41■■□□□ 1.98
PKNOX1-202ENST00000418336 NFE2L2Q16236 605 aa27.41■■□□□ 1.98
PKNOX1-202ENST00000418336 TRAPPC3LQ5T215 181 aa27.41■■□□□ 1.98
PKNOX1-202ENST00000418336 SOS1Q07889 1333 aaPredicted RBP27.4■■□□□ 1.98
PKNOX1-202ENST00000418336 GYS1P13807 737 aa27.39■■□□□ 1.98
PKNOX1-202ENST00000418336 CCDC87Q9NVE4 849 aa27.39■■□□□ 1.98
PKNOX1-202ENST00000418336 KDM3BQ7LBC6 1761 aa27.38■■□□□ 1.97
PKNOX1-202ENST00000418336 BTBD11A6QL63 1104 aa27.38■■□□□ 1.97
PKNOX1-202ENST00000418336 TTC5Q8N0Z6 440 aa27.37■■□□□ 1.97
PKNOX1-202ENST00000418336 NLGN2Q8NFZ4 835 aa27.37■■□□□ 1.97
PKNOX1-202ENST00000418336 RTF1Q92541 710 aaKnown RBP27.37■■□□□ 1.97
PKNOX1-202ENST00000418336 ZBTB1Q9Y2K1 713 aa27.37■■□□□ 1.97
PKNOX1-202ENST00000418336 USP42Q9H9J4 1324 aaKnown RBP27.35■■□□□ 1.97
PKNOX1-202ENST00000418336 SRP68Q9UHB9 627 aaKnown RBP27.34■■□□□ 1.97
PKNOX1-202ENST00000418336 KIF13BQ9NQT8 1826 aa27.33■■□□□ 1.97
PKNOX1-202ENST00000418336 FMNL2Q96PY5 1086 aa27.33■■□□□ 1.97
PKNOX1-202ENST00000418336 THUMPD2Q9BTF0 503 aaKnown RBP27.33■■□□□ 1.97
PKNOX1-202ENST00000418336 PNNQ9H307 717 aaKnown RBP27.33■■□□□ 1.97
PKNOX1-202ENST00000418336 ADAMTS8Q9UP79 889 aa27.33■■□□□ 1.97
PKNOX1-202ENST00000418336 PRAMEF22A3QJZ6 481 aa27.32■■□□□ 1.96
PKNOX1-202ENST00000418336 CCDC184Q52MB2 194 aa27.32■■□□□ 1.96
PKNOX1-202ENST00000418336 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms