RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 TMPRSS4Q9NRS4 437 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 KIAA1024Q9UPX6 916 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 PCDHGA11Q9Y5H2 935 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 ZBTB7CA1YPR0 619 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 SCTRP47872 440 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 PSME1Q06323 249 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 SIX5Q8N196 739 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
NIFKP3-201ENST00000417799 ALDH1A1P00352 501 aa9.26□□□□□ -0.93
NIFKP3-201ENST00000417799 PPP1R26Q5T8A7 1209 aaPredicted RBP9.26□□□□□ -0.93
NIFKP3-201ENST00000417799 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
NIFKP3-201ENST00000417799 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
NIFKP3-201ENST00000417799 NUP160Q12769 1436 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 DKK1O94907 266 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 BRD1O95696 1058 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 NR3C2P08235 984 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 ZNF784Q8NCA9 323 aaPredicted RBP9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 SNIP1Q8TAD8 396 aaKnown RBP9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
NIFKP3-201ENST00000417799 SEC13P55735 322 aa9.24□□□□□ -0.93
NIFKP3-201ENST00000417799 MYT1Q01538 1121 aa9.24□□□□□ -0.93
NIFKP3-201ENST00000417799 LAPTM4AQ15012 233 aa9.24□□□□□ -0.93
NIFKP3-201ENST00000417799 CHD1O14646 1710 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 NNTQ13423 1086 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
NIFKP3-201ENST00000417799 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 TTC24A2A3L6 582 aaPredicted RBP9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 GDF9O60383 454 aa9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 LILRA1O75019 489 aa9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
NIFKP3-201ENST00000417799 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
NIFKP3-201ENST00000417799 SWI5Q1ZZU3 235 aa9.21□□□□□ -0.94
NIFKP3-201ENST00000417799 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
NIFKP3-201ENST00000417799 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
NIFKP3-201ENST00000417799 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 TNFRSF10AO00220 468 aa9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 KCNA1Q09470 495 aa9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
NIFKP3-201ENST00000417799 J3QL48 77 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 LCE2BO14633 110 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 ADD1P35611 737 aaKnown RBP9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 CLIP1P30622 1438 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 IQGAP2Q13576 1575 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 CTTNBP2Q8WZ74 1663 aa9.19□□□□□ -0.94
NIFKP3-201ENST00000417799 HINFPQ9BQA5 517 aa9.18□□□□□ -0.94
NIFKP3-201ENST00000417799 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
NIFKP3-201ENST00000417799 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
NIFKP3-201ENST00000417799 TMEM229AB2RXF0 380 aa9.17□□□□□ -0.94
NIFKP3-201ENST00000417799 M0R2N6 131 aa9.17□□□□□ -0.94
NIFKP3-201ENST00000417799 SCNN1DP51172 638 aa9.17□□□□□ -0.94
NIFKP3-201ENST00000417799 GDF10P55107 478 aa9.17□□□□□ -0.94
NIFKP3-201ENST00000417799 ZNF358Q9NW07 568 aa9.17□□□□□ -0.94
NIFKP3-201ENST00000417799 UGGT2Q9NYU1 1516 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 GNRH1P01148 92 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 SSFA2P28290 1259 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 PRR20EP86478 221 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 PRR20CP86479 221 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 PRR20DP86480 221 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 PRR20BP86481 221 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 PRR20AP86496 221 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 TRIM67Q6ZTA4 783 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 TSEN2Q8NCE0 465 aaKnown RBP9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
NIFKP3-201ENST00000417799 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 BACH1O14867 736 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 PRMT3O60678 531 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 ZIC2O95409 532 aaPredicted RBP9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 INHAP05111 366 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 SMPD1P17405 629 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.94
NIFKP3-201ENST00000417799 ARHGAP35Q9NRY4 1499 aa9.15□□□□□ -0.95
NIFKP3-201ENST00000417799 LGR5O75473 907 aa9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 ADH1AP07327 375 aa9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 CBLBQ13191 982 aa9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
NIFKP3-201ENST00000417799 Q6ZVU0 165 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 PRIMPOLQ96LW4 560 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 ARHGEF10LQ9HCE6 1279 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms