RNA–Protein interactions for RNA: ENST00000417542.1

AL355339.1-202, humanhuman

TSL 2 BASIC

Gene AL355339.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355339.1-202ENST00000417542 WDR90Q96KV7 1748 aa8.62□□□□□ -1.03
AL355339.1-202ENST00000417542 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
AL355339.1-202ENST00000417542 C16orf71Q8IYS4 520 aaPredicted RBP8.61□□□□□ -1.03
AL355339.1-202ENST00000417542 PIK3C2AO00443 1686 aa8.61□□□□□ -1.03
AL355339.1-202ENST00000417542 RBM46Q8TBY0 533 aaKnown RBP8.6□□□□□ -1.03
AL355339.1-202ENST00000417542 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
AL355339.1-202ENST00000417542 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
AL355339.1-202ENST00000417542 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
AL355339.1-202ENST00000417542 ERBB3P21860 1342 aa8.59□□□□□ -1.03
AL355339.1-202ENST00000417542 TTC21BQ7Z4L5 1316 aa8.59□□□□□ -1.03
AL355339.1-202ENST00000417542 NUBP1P53384 320 aa8.59□□□□□ -1.03
AL355339.1-202ENST00000417542 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
AL355339.1-202ENST00000417542 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
AL355339.1-202ENST00000417542 HSPA1AP0DMV8 641 aaKnown RBP8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 HSPA1BP0DMV9 641 aaKnown RBP8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 FLAD1Q8NFF5 587 aa8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 ANKRD36BQ8N2N9 1353 aa8.58□□□□□ -1.04
AL355339.1-202ENST00000417542 LY75O60449 1722 aa8.57□□□□□ -1.04
AL355339.1-202ENST00000417542 CENPJQ9HC77 1338 aaPredicted RBP8.57□□□□□ -1.04
AL355339.1-202ENST00000417542 FSTL1Q12841 308 aa8.57□□□□□ -1.04
AL355339.1-202ENST00000417542 ARHGAP27Q6ZUM4 889 aa8.57□□□□□ -1.04
AL355339.1-202ENST00000417542 USP47Q96K76 1375 aa8.57□□□□□ -1.04
AL355339.1-202ENST00000417542 TTC21AQ8NDW8 1320 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 NFAT5O94916 1531 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 NBPF1Q3BBV0 1214 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 NSD2O96028 1365 aa8.56□□□□□ -1.04
AL355339.1-202ENST00000417542 PHF14O94880 888 aa8.55□□□□□ -1.04
AL355339.1-202ENST00000417542 EMP3P54852 163 aa8.55□□□□□ -1.04
AL355339.1-202ENST00000417542 DOT1LQ8TEK3 1739 aa8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 SMIM5Q71RC9 77 aa8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 AK7Q96M32 723 aa8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
AL355339.1-202ENST00000417542 HMGB2P26583 209 aaKnown RBP8.53□□□□□ -1.04
AL355339.1-202ENST00000417542 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
AL355339.1-202ENST00000417542 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
AL355339.1-202ENST00000417542 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
AL355339.1-202ENST00000417542 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
AL355339.1-202ENST00000417542 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 A0A0G2JLW4 131 aa8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 AMIGO3Q86WK7 504 aa8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 SMC1BQ8NDV3 1235 aa8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 C5P01031 1676 aa8.52□□□□□ -1.05
AL355339.1-202ENST00000417542 KCPQ6ZWJ8 1503 aa8.51□□□□□ -1.05
AL355339.1-202ENST00000417542 FCHSD2O94868 740 aa8.51□□□□□ -1.05
AL355339.1-202ENST00000417542 NME9Q86XW9 330 aa8.51□□□□□ -1.05
AL355339.1-202ENST00000417542 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
AL355339.1-202ENST00000417542 LTN1O94822 1766 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 MMP10P09238 476 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 TGFB2P61812 414 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
AL355339.1-202ENST00000417542 USP54Q70EL1 1684 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 USP31Q70CQ4 1352 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 PCNTO95613 3336 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 N4BP2Q86UW6 1770 aaPredicted RBP8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 DPEP1P16444 411 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 IP6K1Q92551 441 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 RNF181Q9P0P0 153 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 C4BP0C0L5 1744 aa8.49□□□□□ -1.05
AL355339.1-202ENST00000417542 TAF1LQ8IZX4 1826 aa8.48□□□□□ -1.05
AL355339.1-202ENST00000417542 SSFA2P28290 1259 aa8.48□□□□□ -1.05
AL355339.1-202ENST00000417542 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
AL355339.1-202ENST00000417542 NSD3Q9BZ95 1437 aa8.47□□□□□ -1.05
AL355339.1-202ENST00000417542 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
AL355339.1-202ENST00000417542 RAB3GAP2Q9H2M9 1393 aa8.47□□□□□ -1.05
AL355339.1-202ENST00000417542 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.05
AL355339.1-202ENST00000417542 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.05
AL355339.1-202ENST00000417542 MEGF6O75095 1541 aa8.46□□□□□ -1.05
AL355339.1-202ENST00000417542 GNPATO15228 680 aa8.46□□□□□ -1.06
AL355339.1-202ENST00000417542 FOXN1O15353 648 aa8.46□□□□□ -1.06
AL355339.1-202ENST00000417542 SMARCC1Q92922 1105 aaPredicted RBP8.46□□□□□ -1.06
AL355339.1-202ENST00000417542 UBR3Q6ZT12 1888 aa8.46□□□□□ -1.06
AL355339.1-202ENST00000417542 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.06
AL355339.1-202ENST00000417542 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 VEGFAP15692 232 aaPredicted RBP8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 AMPHP49418 695 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 LINC00116Q8NCU8 138 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 RAPGEF4Q8WZA2 1011 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 CCDC87Q9NVE4 849 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 PIM2Q9P1W9 311 aa8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
AL355339.1-202ENST00000417542 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms