RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 NBPF4Q96M43 638 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 PUS7Q96PZ0 661 aaKnown RBP10.14□□□□□ -0.79
CASP4-202ENST00000417440 TESK2Q96S53 571 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 BTAF1O14981 1849 aa10.13□□□□□ -0.79
CASP4-202ENST00000417440 RAPGEF4Q8WZA2 1011 aa10.13□□□□□ -0.79
CASP4-202ENST00000417440 UTRNP46939 3433 aa10.13□□□□□ -0.79
CASP4-202ENST00000417440 LTN1O94822 1766 aa10.13□□□□□ -0.79
CASP4-202ENST00000417440 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
CASP4-202ENST00000417440 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
CASP4-202ENST00000417440 TATP17735 454 aaPredicted RBP10.12□□□□□ -0.79
CASP4-202ENST00000417440 C1QTNF8P60827 252 aa10.12□□□□□ -0.79
CASP4-202ENST00000417440 USP47Q96K76 1375 aa10.12□□□□□ -0.79
CASP4-202ENST00000417440 FYB1O15117 783 aa10.11□□□□□ -0.79
CASP4-202ENST00000417440 CLCN6P51797 869 aa10.11□□□□□ -0.79
CASP4-202ENST00000417440 COL23A1Q86Y22 540 aaPredicted RBP10.11□□□□□ -0.79
CASP4-202ENST00000417440 MEGF6O75095 1541 aa10.11□□□□□ -0.79
CASP4-202ENST00000417440 NSD2O96028 1365 aa10.11□□□□□ -0.79
CASP4-202ENST00000417440 MAP3K5Q99683 1374 aa10.11□□□□□ -0.79
CASP4-202ENST00000417440 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
CASP4-202ENST00000417440 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
CASP4-202ENST00000417440 TMF1P82094 1093 aa10.1□□□□□ -0.79
CASP4-202ENST00000417440 HSP90AB2PQ58FF8 381 aa10.1□□□□□ -0.79
CASP4-202ENST00000417440 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
CASP4-202ENST00000417440 RYDENQ9NUL5 291 aaKnown RBP10.1□□□□□ -0.79
CASP4-202ENST00000417440 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
CASP4-202ENST00000417440 USP54Q70EL1 1684 aa10.09□□□□□ -0.79
CASP4-202ENST00000417440 YBX3P16989 372 aaKnown RBP eCLIP10.09□□□□□ -0.79
CASP4-202ENST00000417440 EVX2Q03828 476 aa10.09□□□□□ -0.79
CASP4-202ENST00000417440 SMIM5Q71RC9 77 aa10.09□□□□□ -0.79
CASP4-202ENST00000417440 MS4A3Q96HJ5 214 aa10.09□□□□□ -0.79
CASP4-202ENST00000417440 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
CASP4-202ENST00000417440 SMG6Q86US8 1419 aaKnown RBP10.08□□□□□ -0.8
CASP4-202ENST00000417440 PHF14O94880 888 aa10.08□□□□□ -0.8
CASP4-202ENST00000417440 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
CASP4-202ENST00000417440 RTL1A6NKG5 1358 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 AK7Q96M32 723 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
CASP4-202ENST00000417440 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
CASP4-202ENST00000417440 ZNF526Q8TF50 670 aaPredicted RBP10.06□□□□□ -0.8
CASP4-202ENST00000417440 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
CASP4-202ENST00000417440 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
CASP4-202ENST00000417440 DOT1LQ8TEK3 1739 aa10.06□□□□□ -0.8
CASP4-202ENST00000417440 INSRP06213 1382 aa10.05□□□□□ -0.8
CASP4-202ENST00000417440 CYP27B1O15528 508 aa10.05□□□□□ -0.8
CASP4-202ENST00000417440 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
CASP4-202ENST00000417440 FAM208AQ9UK61 1670 aaKnown RBP10.05□□□□□ -0.8
CASP4-202ENST00000417440 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
CASP4-202ENST00000417440 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
CASP4-202ENST00000417440 AMIGO3Q86WK7 504 aa10.04□□□□□ -0.8
CASP4-202ENST00000417440 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
CASP4-202ENST00000417440 PIGBQ92521 554 aa10.04□□□□□ -0.8
CASP4-202ENST00000417440 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
CASP4-202ENST00000417440 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
CASP4-202ENST00000417440 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
CASP4-202ENST00000417440 FLT4P35916 1363 aa10.03□□□□□ -0.8
CASP4-202ENST00000417440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
CASP4-202ENST00000417440 TNNT2P45379 298 aaPredicted RBP10.03□□□□□ -0.8
CASP4-202ENST00000417440 SPG7Q9UQ90 795 aa10.03□□□□□ -0.8
CASP4-202ENST00000417440 NSD3Q9BZ95 1437 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 TIE1P35590 1138 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 TMEM106CQ9BVX2 250 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 CD2APQ9Y5K6 639 aa10.02□□□□□ -0.81
CASP4-202ENST00000417440 TUBGCP6Q96RT7 1819 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
CASP4-202ENST00000417440 SIK1P57059 783 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 EYA1Q99502 592 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
CASP4-202ENST00000417440 ASAP1Q9ULH1 1129 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 LY75O60449 1722 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
CASP4-202ENST00000417440 ATP10DQ9P241 1426 aa10□□□□□ -0.81
CASP4-202ENST00000417440 CHD4Q14839 1912 aa10□□□□□ -0.81
CASP4-202ENST00000417440 QSER1Q2KHR3 1735 aa10□□□□□ -0.81
CASP4-202ENST00000417440 GNPATO15228 680 aa10□□□□□ -0.81
CASP4-202ENST00000417440 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
CASP4-202ENST00000417440 ATP6V1AP38606 617 aa10□□□□□ -0.81
CASP4-202ENST00000417440 EFCAB3Q8N7B9 438 aa10□□□□□ -0.81
CASP4-202ENST00000417440 MFRPQ9BY79 579 aa10□□□□□ -0.81
CASP4-202ENST00000417440 IGSF1Q8N6C5 1336 aa10□□□□□ -0.81
CASP4-202ENST00000417440 ITPK1Q13572 414 aa9.99□□□□□ -0.81
CASP4-202ENST00000417440 KIF24Q5T7B8 1368 aa9.99□□□□□ -0.81
CASP4-202ENST00000417440 PHKG2P15735 406 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 SSFA2P28290 1259 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 ATG3Q9NT62 314 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 POLKQ9UBT6 870 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 WASHC2AQ641Q2 1341 aa9.98□□□□□ -0.81
CASP4-202ENST00000417440 COL24A1Q17RW2 1714 aa9.97□□□□□ -0.81
CASP4-202ENST00000417440 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
CASP4-202ENST00000417440 MMP10P09238 476 aa9.97□□□□□ -0.81
CASP4-202ENST00000417440 EIF4A2Q14240 407 aaKnown RBP9.97□□□□□ -0.81
CASP4-202ENST00000417440 C5P01031 1676 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms