RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 WDR63Q8IWG1 891 aa10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 LRRC4BQ9NT99 713 aa10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 KDRP35968 1356 aa10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 CSB-PGBD3P0DP91 1061 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 HSPA6P17066 643 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 AMPHP49418 695 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 CDCA7LQ96GN5 454 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 PHACTR3Q96KR7 559 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 EYA1Q99502 592 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
AP001042.1-201ENST00000416842 LY75O60449 1722 aa10.62□□□□□ -0.71
AP001042.1-201ENST00000416842 POLD1P28340 1107 aa10.62□□□□□ -0.71
AP001042.1-201ENST00000416842 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
AP001042.1-201ENST00000416842 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
AP001042.1-201ENST00000416842 LTN1O94822 1766 aa10.62□□□□□ -0.71
AP001042.1-201ENST00000416842 PNPLA7Q6ZV29 1317 aa10.61□□□□□ -0.71
AP001042.1-201ENST00000416842 GOLGB1Q14789 3259 aaKnown RBP10.61□□□□□ -0.71
AP001042.1-201ENST00000416842 NCAPD2Q15021 1401 aa10.61□□□□□ -0.71
AP001042.1-201ENST00000416842 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
AP001042.1-201ENST00000416842 IL16Q14005 1332 aa10.6□□□□□ -0.71
AP001042.1-201ENST00000416842 GRIN3BO60391 1043 aa10.6□□□□□ -0.71
AP001042.1-201ENST00000416842 NFE2L2Q16236 605 aa10.6□□□□□ -0.71
AP001042.1-201ENST00000416842 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
AP001042.1-201ENST00000416842 ADCY9O60503 1353 aa10.6□□□□□ -0.71
AP001042.1-201ENST00000416842 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 E9PSI1 815 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 SOX12O15370 315 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 HMOX1P09601 288 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 AEBP1Q8IUX7 1158 aa10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
AP001042.1-201ENST00000416842 RIPK4P57078 832 aa10.58□□□□□ -0.72
AP001042.1-201ENST00000416842 NBPF6Q5VWK0 638 aa10.58□□□□□ -0.72
AP001042.1-201ENST00000416842 NBPF4Q96M43 638 aa10.58□□□□□ -0.72
AP001042.1-201ENST00000416842 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 KCNQ4P56696 695 aa10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 GTF3C3Q9Y5Q9 886 aa10.57□□□□□ -0.72
AP001042.1-201ENST00000416842 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
AP001042.1-201ENST00000416842 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
AP001042.1-201ENST00000416842 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
AP001042.1-201ENST00000416842 IL2RBP14784 551 aa10.55□□□□□ -0.72
AP001042.1-201ENST00000416842 NLRP2Q9NX02 1062 aa10.55□□□□□ -0.72
AP001042.1-201ENST00000416842 TAF1LQ8IZX4 1826 aa10.55□□□□□ -0.72
AP001042.1-201ENST00000416842 ERBB3P21860 1342 aa10.55□□□□□ -0.72
AP001042.1-201ENST00000416842 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 C5P01031 1676 aa10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 FAM208AQ9UK61 1670 aaKnown RBP10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 MTHFSDQ2M296 383 aaKnown RBP10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
AP001042.1-201ENST00000416842 RGPD2P0DJD1 1756 aa10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 ERICH6BQ5W0A0 696 aa10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 COL23A1Q86Y22 540 aaPredicted RBP10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 WDR90Q96KV7 1748 aa10.53□□□□□ -0.72
AP001042.1-201ENST00000416842 KIF3CO14782 793 aa10.52□□□□□ -0.73
AP001042.1-201ENST00000416842 NEFMP07197 916 aa10.52□□□□□ -0.73
AP001042.1-201ENST00000416842 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
AP001042.1-201ENST00000416842 MSL1Q68DK7 614 aa10.52□□□□□ -0.73
AP001042.1-201ENST00000416842 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
AP001042.1-201ENST00000416842 CHL1O00533 1208 aa10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
AP001042.1-201ENST00000416842 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 APLP1P51693 650 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 DNAJC5GQ8N7S2 189 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 DDX54Q8TDD1 881 aaKnown RBP10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 CFAP44Q96MT7 982 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 CICQ96RK0 1608 aaPredicted RBP10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 TOGARAM1Q9Y4F4 1720 aa10.5□□□□□ -0.73
AP001042.1-201ENST00000416842 UBR3Q6ZT12 1888 aa10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 CEMIPQ8WUJ3 1361 aa10.49□□□□□ -0.73
AP001042.1-201ENST00000416842 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
AP001042.1-201ENST00000416842 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
AP001042.1-201ENST00000416842 GNAI1P63096 354 aa10.48□□□□□ -0.73
AP001042.1-201ENST00000416842 USHBP1Q8N6Y0 703 aa10.48□□□□□ -0.73
AP001042.1-201ENST00000416842 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 PLEKHO1Q53GL0 409 aaPredicted RBP10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms