RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 ANXA1P04083 346 aa12.31□□□□□ -0.44
LINC00494-201ENST00000416742 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
LINC00494-201ENST00000416742 LRRFIP2Q9Y608 721 aaKnown RBP12.31□□□□□ -0.44
LINC00494-201ENST00000416742 NWD1Q149M9 1564 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
LINC00494-201ENST00000416742 KIF2CQ99661 725 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 PNMA6EA0A0J9YXQ4 647 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 TSHZ3Q63HK5 1081 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
LINC00494-201ENST00000416742 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
LINC00494-201ENST00000416742 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
LINC00494-201ENST00000416742 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
LINC00494-201ENST00000416742 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
LINC00494-201ENST00000416742 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
LINC00494-201ENST00000416742 SNX21Q969T3 373 aa12.29□□□□□ -0.44
LINC00494-201ENST00000416742 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
LINC00494-201ENST00000416742 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
LINC00494-201ENST00000416742 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
LINC00494-201ENST00000416742 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 MCM4P33991 863 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 PDE1AP54750 535 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 USP44Q9H0E7 712 aa12.28□□□□□ -0.44
LINC00494-201ENST00000416742 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.44
LINC00494-201ENST00000416742 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
LINC00494-201ENST00000416742 ARXQ96QS3 562 aa12.27□□□□□ -0.45
LINC00494-201ENST00000416742 SRCIN1Q9C0H9 1055 aa12.27□□□□□ -0.45
LINC00494-201ENST00000416742 LTN1O94822 1766 aa12.27□□□□□ -0.45
LINC00494-201ENST00000416742 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
LINC00494-201ENST00000416742 PI4KAP2A4QPH2 592 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 PI4KAP1Q8N8J0 262 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
LINC00494-201ENST00000416742 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
LINC00494-201ENST00000416742 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
LINC00494-201ENST00000416742 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
LINC00494-201ENST00000416742 AMOTQ4VCS5 1084 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
LINC00494-201ENST00000416742 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
LINC00494-201ENST00000416742 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
LINC00494-201ENST00000416742 NFAT5O94916 1531 aa12.25□□□□□ -0.45
LINC00494-201ENST00000416742 SURF6O75683 361 aaKnown RBP12.25□□□□□ -0.45
LINC00494-201ENST00000416742 ATF3P18847 181 aa12.25□□□□□ -0.45
LINC00494-201ENST00000416742 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
LINC00494-201ENST00000416742 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
LINC00494-201ENST00000416742 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
LINC00494-201ENST00000416742 DNAAF4Q8WXU2 420 aa12.24□□□□□ -0.45
LINC00494-201ENST00000416742 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
LINC00494-201ENST00000416742 MX1P20591 662 aa12.24□□□□□ -0.45
LINC00494-201ENST00000416742 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
LINC00494-201ENST00000416742 RABEP1Q15276 862 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 ERC2O15083 957 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 REC8O95072 547 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
LINC00494-201ENST00000416742 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 SRGAP3O43295 1099 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 NUTM1Q86Y26 1132 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
LINC00494-201ENST00000416742 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
LINC00494-201ENST00000416742 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
LINC00494-201ENST00000416742 LRRC37A3O60309 1634 aa12.22□□□□□ -0.45
LINC00494-201ENST00000416742 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
LINC00494-201ENST00000416742 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
LINC00494-201ENST00000416742 ADAMTSL3P82987 1691 aa12.22□□□□□ -0.45
LINC00494-201ENST00000416742 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.45
LINC00494-201ENST00000416742 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
LINC00494-201ENST00000416742 TRAK2O60296 914 aa12.21□□□□□ -0.45
LINC00494-201ENST00000416742 HOXB7P09629 217 aa12.21□□□□□ -0.45
LINC00494-201ENST00000416742 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
LINC00494-201ENST00000416742 ZNF142P52746 1687 aaPredicted RBP12.21□□□□□ -0.45
LINC00494-201ENST00000416742 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-201ENST00000416742 USP54Q70EL1 1684 aa12.21□□□□□ -0.46
LINC00494-201ENST00000416742 MAP4K4O95819 1239 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-201ENST00000416742 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-201ENST00000416742 BEND3Q5T5X7 828 aa12.21□□□□□ -0.46
LINC00494-201ENST00000416742 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-201ENST00000416742 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 SSH3Q8TE77 659 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
LINC00494-201ENST00000416742 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
LINC00494-201ENST00000416742 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
LINC00494-201ENST00000416742 C1orf167Q5SNV9 1468 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
LINC00494-201ENST00000416742 PXDNQ92626 1479 aa12.2□□□□□ -0.46
LINC00494-201ENST00000416742 DDIT3P35638 169 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 RHPN1Q8TCX5 695 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 ST18O60284 1047 aa12.19□□□□□ -0.46
LINC00494-201ENST00000416742 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
LINC00494-201ENST00000416742 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms