RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ABCC6O95255 1503 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 CCDC30Q5VVM6 783 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 COL5A2P05997 1499 aaPredicted RBP13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 PHKG2P15735 406 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 CACNA1FO60840 1977 aa13.51□□□□□ -0.25
SMPD4P1-201ENST00000416717 RGS12O14924 1447 aa13.5□□□□□ -0.25
SMPD4P1-201ENST00000416717 CYP27B1O15528 508 aa13.5□□□□□ -0.25
SMPD4P1-201ENST00000416717 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
SMPD4P1-201ENST00000416717 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 PTPRCP08575 1304 aa13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
SMPD4P1-201ENST00000416717 PDE4AP27815 886 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 NFATC2IPQ8NCF5 419 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 ANXA1P04083 346 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 FLIIQ13045 1269 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
SMPD4P1-201ENST00000416717 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
SMPD4P1-201ENST00000416717 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
SMPD4P1-201ENST00000416717 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
SMPD4P1-201ENST00000416717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMPD4P1-201ENST00000416717 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
SMPD4P1-201ENST00000416717 PHLPP1O60346 1717 aa13.46□□□□□ -0.25
SMPD4P1-201ENST00000416717 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
SMPD4P1-201ENST00000416717 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
SMPD4P1-201ENST00000416717 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
SMPD4P1-201ENST00000416717 ADAMTS7Q9UKP4 1686 aa13.46□□□□□ -0.25
SMPD4P1-201ENST00000416717 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.26
SMPD4P1-201ENST00000416717 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.26
SMPD4P1-201ENST00000416717 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.26
SMPD4P1-201ENST00000416717 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
SMPD4P1-201ENST00000416717 AHDC1Q5TGY3 1603 aaPredicted RBP13.45□□□□□ -0.26
SMPD4P1-201ENST00000416717 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
SMPD4P1-201ENST00000416717 MEIS3Q99687 375 aa13.45□□□□□ -0.26
SMPD4P1-201ENST00000416717 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
SMPD4P1-201ENST00000416717 ADAMTS2O95450 1211 aa13.44□□□□□ -0.26
SMPD4P1-201ENST00000416717 IL2RBP14784 551 aa13.44□□□□□ -0.26
SMPD4P1-201ENST00000416717 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
SMPD4P1-201ENST00000416717 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
SMPD4P1-201ENST00000416717 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
SMPD4P1-201ENST00000416717 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 CABP4P57796 275 aa13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-201ENST00000416717 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 TOM1O60784 492 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 HOXB7P09629 217 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 C5P01031 1676 aa13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
SMPD4P1-201ENST00000416717 COL14A1Q05707 1796 aaKnown RBP13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 TTC5Q8N0Z6 440 aa13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
SMPD4P1-201ENST00000416717 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
SMPD4P1-201ENST00000416717 FAM161AQ3B820 660 aa13.4□□□□□ -0.26
SMPD4P1-201ENST00000416717 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
SMPD4P1-201ENST00000416717 PI4KAP2A4QPH2 592 aa13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 PI4KAP1Q8N8J0 262 aa13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
SMPD4P1-201ENST00000416717 MYL6BP14649 208 aa13.38□□□□□ -0.27
SMPD4P1-201ENST00000416717 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
SMPD4P1-201ENST00000416717 APBB1O00213 710 aa13.38□□□□□ -0.27
SMPD4P1-201ENST00000416717 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
SMPD4P1-201ENST00000416717 MRC1P22897 1456 aa13.38□□□□□ -0.27
SMPD4P1-201ENST00000416717 NUCB1Q02818 461 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
SMPD4P1-201ENST00000416717 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
SMPD4P1-201ENST00000416717 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms