RNA–Protein interactions for RNA: ENST00000416519.1

TUBBP6-201, Transcript of tubulin beta class I pseudogene 6, humanhuman

BASIC

Gene TUBBP6, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP6-201ENST00000416519 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
TUBBP6-201ENST00000416519 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
TUBBP6-201ENST00000416519 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
TUBBP6-201ENST00000416519 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
TUBBP6-201ENST00000416519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
TUBBP6-201ENST00000416519 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
TUBBP6-201ENST00000416519 GNPATO15228 680 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 GRIN3BO60391 1043 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 GPR162Q16538 588 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 SLC52A2Q9HAB3 445 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 CNTNAP4Q9C0A0 1308 aa13.93□□□□□ -0.18
TUBBP6-201ENST00000416519 HMOX1P09601 288 aa13.92□□□□□ -0.18
TUBBP6-201ENST00000416519 ITPK1Q13572 414 aa13.92□□□□□ -0.18
TUBBP6-201ENST00000416519 ITGB4P16144 1822 aa13.92□□□□□ -0.18
TUBBP6-201ENST00000416519 C5P01031 1676 aa13.92□□□□□ -0.18
TUBBP6-201ENST00000416519 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
TUBBP6-201ENST00000416519 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
TUBBP6-201ENST00000416519 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
TUBBP6-201ENST00000416519 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
TUBBP6-201ENST00000416519 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
TUBBP6-201ENST00000416519 PHF14O94880 888 aa13.9□□□□□ -0.18
TUBBP6-201ENST00000416519 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
TUBBP6-201ENST00000416519 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
TUBBP6-201ENST00000416519 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
TUBBP6-201ENST00000416519 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
TUBBP6-201ENST00000416519 GNAT3A8MTJ3 354 aa13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 PTCD1O75127 700 aaKnown RBP13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 FCHSD2O94868 740 aa13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 RFC4P35249 363 aa13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.19
TUBBP6-201ENST00000416519 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
TUBBP6-201ENST00000416519 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
TUBBP6-201ENST00000416519 NEFMP07197 916 aa13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 TEFQ10587 303 aa13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 PNNQ9H307 717 aaKnown RBP13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 TAF1LQ8IZX4 1826 aa13.88□□□□□ -0.19
TUBBP6-201ENST00000416519 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
TUBBP6-201ENST00000416519 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
TUBBP6-201ENST00000416519 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
TUBBP6-201ENST00000416519 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
TUBBP6-201ENST00000416519 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
TUBBP6-201ENST00000416519 TGFB2P61812 414 aa13.86□□□□□ -0.19
TUBBP6-201ENST00000416519 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
TUBBP6-201ENST00000416519 STARD3NLO95772 234 aa13.85□□□□□ -0.19
TUBBP6-201ENST00000416519 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 ZPR1O75312 459 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 MMP10P09238 476 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 NLGN2Q8NFZ4 835 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 PARP3Q9Y6F1 533 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
TUBBP6-201ENST00000416519 MRC1P22897 1456 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 GYS1P13807 737 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 RALBP1Q15311 655 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
TUBBP6-201ENST00000416519 A0A087WZG4 1122 aa13.82□□□□□ -0.2
TUBBP6-201ENST00000416519 CYP19A1P11511 503 aaPredicted RBP13.82□□□□□ -0.2
TUBBP6-201ENST00000416519 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
TUBBP6-201ENST00000416519 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
TUBBP6-201ENST00000416519 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
TUBBP6-201ENST00000416519 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
TUBBP6-201ENST00000416519 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
TUBBP6-201ENST00000416519 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
TUBBP6-201ENST00000416519 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
TUBBP6-201ENST00000416519 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
TUBBP6-201ENST00000416519 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
TUBBP6-201ENST00000416519 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
TUBBP6-201ENST00000416519 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
TUBBP6-201ENST00000416519 ZNF784Q8NCA9 323 aaPredicted RBP13.79□□□□□ -0.2
TUBBP6-201ENST00000416519 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
TUBBP6-201ENST00000416519 NARFQ9UHQ1 456 aa13.79□□□□□ -0.2
TUBBP6-201ENST00000416519 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
TUBBP6-201ENST00000416519 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
TUBBP6-201ENST00000416519 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
TUBBP6-201ENST00000416519 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
TUBBP6-201ENST00000416519 YBX3P16989 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
TUBBP6-201ENST00000416519 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
TUBBP6-201ENST00000416519 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
TUBBP6-201ENST00000416519 TM4SF1P30408 202 aa13.76□□□□□ -0.21
TUBBP6-201ENST00000416519 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
TUBBP6-201ENST00000416519 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
TUBBP6-201ENST00000416519 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
TUBBP6-201ENST00000416519 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
TUBBP6-201ENST00000416519 TAF7Q15545 349 aaPredicted RBP13.75□□□□□ -0.21
TUBBP6-201ENST00000416519 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
TUBBP6-201ENST00000416519 RGL2O15211 777 aa13.74□□□□□ -0.21
TUBBP6-201ENST00000416519 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms