RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PRR20EP86478 221 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 PRR20CP86479 221 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 PRR20DP86480 221 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 PRR20BP86481 221 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 PRR20AP86496 221 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
EPHA4-204ENST00000415749 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 CUL7Q14999 1698 aa9.7□□□□□ -0.86
EPHA4-204ENST00000415749 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
EPHA4-204ENST00000415749 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
EPHA4-204ENST00000415749 LARP1Q6PKG0 1096 aaKnown RBP9.69□□□□□ -0.86
EPHA4-204ENST00000415749 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
EPHA4-204ENST00000415749 KDM5BQ9UGL1 1544 aa9.69□□□□□ -0.86
EPHA4-204ENST00000415749 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
EPHA4-204ENST00000415749 MFAP1P55081 439 aaKnown RBP9.68□□□□□ -0.86
EPHA4-204ENST00000415749 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
EPHA4-204ENST00000415749 PDE4CQ08493 712 aa9.68□□□□□ -0.86
EPHA4-204ENST00000415749 TSGA10IPQ3SY00 556 aa9.68□□□□□ -0.86
EPHA4-204ENST00000415749 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-204ENST00000415749 EMILIN1Q9Y6C2 1016 aa9.68□□□□□ -0.86
EPHA4-204ENST00000415749 CD109Q6YHK3 1445 aa9.67□□□□□ -0.86
EPHA4-204ENST00000415749 KIF27Q86VH2 1401 aa9.67□□□□□ -0.86
EPHA4-204ENST00000415749 ATG7O95352 703 aa9.67□□□□□ -0.86
EPHA4-204ENST00000415749 NNTQ13423 1086 aa9.67□□□□□ -0.86
EPHA4-204ENST00000415749 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 FAM196BA6NMK8 535 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 RASA1P20936 1047 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 MYT1Q01538 1121 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 PPP1R26Q5T8A7 1209 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-204ENST00000415749 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 CDCA7Q9BWT1 371 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-204ENST00000415749 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 PTPRMP28827 1452 aa9.66□□□□□ -0.86
EPHA4-204ENST00000415749 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
EPHA4-204ENST00000415749 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-204ENST00000415749 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-204ENST00000415749 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
EPHA4-204ENST00000415749 NR3C2P08235 984 aa9.64□□□□□ -0.87
EPHA4-204ENST00000415749 GTF2IP78347 998 aa9.64□□□□□ -0.87
EPHA4-204ENST00000415749 OGFOD1Q8N543 542 aa9.64□□□□□ -0.87
EPHA4-204ENST00000415749 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
EPHA4-204ENST00000415749 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
EPHA4-204ENST00000415749 MAGI3Q5TCQ9 1506 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L21D6R901 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
EPHA4-204ENST00000415749 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 ZNF784Q8NCA9 323 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-204ENST00000415749 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 WDR7Q9Y4E6 1490 aa9.63□□□□□ -0.87
EPHA4-204ENST00000415749 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 ARID4BQ4LE39 1312 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-204ENST00000415749 J3QL48 77 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 RBM25P49756 843 aaKnown RBP9.62□□□□□ -0.87
EPHA4-204ENST00000415749 HSPA2P54652 639 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 PSME1Q06323 249 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 TRIM67Q6ZTA4 783 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
EPHA4-204ENST00000415749 KIF21BO75037 1637 aa9.61□□□□□ -0.87
EPHA4-204ENST00000415749 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
EPHA4-204ENST00000415749 SCTRP47872 440 aa9.61□□□□□ -0.87
EPHA4-204ENST00000415749 CYP2U1Q7Z449 544 aa9.61□□□□□ -0.87
EPHA4-204ENST00000415749 USTQ9Y2C2 406 aa9.61□□□□□ -0.87
EPHA4-204ENST00000415749 IQGAP2Q13576 1575 aa9.61□□□□□ -0.87
EPHA4-204ENST00000415749 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
EPHA4-204ENST00000415749 SMPD1P17405 629 aa9.6□□□□□ -0.87
EPHA4-204ENST00000415749 CLDN10P78369 228 aa9.6□□□□□ -0.87
EPHA4-204ENST00000415749 PTK7Q13308 1070 aa9.6□□□□□ -0.87
EPHA4-204ENST00000415749 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
EPHA4-204ENST00000415749 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
EPHA4-204ENST00000415749 WDR4P57081 412 aaKnown RBP9.59□□□□□ -0.87
EPHA4-204ENST00000415749 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
EPHA4-204ENST00000415749 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
EPHA4-204ENST00000415749 SIX5Q8N196 739 aa9.59□□□□□ -0.87
EPHA4-204ENST00000415749 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
EPHA4-204ENST00000415749 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
EPHA4-204ENST00000415749 PCDHGA11Q9Y5H2 935 aa9.59□□□□□ -0.87
EPHA4-204ENST00000415749 PCF11O94913 1555 aaKnown RBP9.58□□□□□ -0.88
EPHA4-204ENST00000415749 ARAP3Q8WWN8 1544 aa9.58□□□□□ -0.88
EPHA4-204ENST00000415749 LILRA1O75019 489 aa9.58□□□□□ -0.88
EPHA4-204ENST00000415749 ZIC2O95409 532 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-204ENST00000415749 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
EPHA4-204ENST00000415749 ADAMTSL3P82987 1691 aa9.58□□□□□ -0.88
EPHA4-204ENST00000415749 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
EPHA4-204ENST00000415749 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
EPHA4-204ENST00000415749 TPCN2Q8NHX9 752 aa9.57□□□□□ -0.88
EPHA4-204ENST00000415749 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
EPHA4-204ENST00000415749 CFAP43Q8NDM7 1665 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms