RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
RFFL-205ENST00000415395 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
RFFL-205ENST00000415395 NWD2Q9ULI1 1742 aa14.65□□□□□ -0.06
RFFL-205ENST00000415395 MRC1P22897 1456 aa14.64□□□□□ -0.07
RFFL-205ENST00000415395 EVA1CP58658 441 aa14.64□□□□□ -0.07
RFFL-205ENST00000415395 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
RFFL-205ENST00000415395 NOB1Q9ULX3 412 aaKnown RBP14.64□□□□□ -0.07
RFFL-205ENST00000415395 TRIM27P14373 513 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 PHKG2P15735 406 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 WNK3Q9BYP7 1800 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 HOXB7P09629 217 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 PIP4K2BP78356 416 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
RFFL-205ENST00000415395 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
RFFL-205ENST00000415395 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
RFFL-205ENST00000415395 IL2RBP14784 551 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 PCDH11XQ9BZA7 1347 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 PCDH11YQ9BZA8 1340 aa14.62□□□□□ -0.07
RFFL-205ENST00000415395 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
RFFL-205ENST00000415395 RLBP1P12271 317 aa14.61□□□□□ -0.07
RFFL-205ENST00000415395 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
RFFL-205ENST00000415395 DCAF5Q96JK2 942 aa14.61□□□□□ -0.07
RFFL-205ENST00000415395 API5Q9BZZ5 524 aaKnown RBP14.61□□□□□ -0.07
RFFL-205ENST00000415395 COG6Q9Y2V7 657 aa14.61□□□□□ -0.07
RFFL-205ENST00000415395 CERKQ8TCT0 537 aa14.61□□□□□ -0.07
RFFL-205ENST00000415395 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
RFFL-205ENST00000415395 PTPRCP08575 1304 aa14.6□□□□□ -0.07
RFFL-205ENST00000415395 BTBD11A6QL63 1104 aa14.6□□□□□ -0.07
RFFL-205ENST00000415395 KRT24Q2M2I5 525 aa14.6□□□□□ -0.07
RFFL-205ENST00000415395 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
RFFL-205ENST00000415395 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
RFFL-205ENST00000415395 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
RFFL-205ENST00000415395 DDX19BQ9UMR2 479 aa14.6□□□□□ -0.07
RFFL-205ENST00000415395 JCADQ9P266 1359 aa14.59□□□□□ -0.07
RFFL-205ENST00000415395 CYP27B1O15528 508 aa14.59□□□□□ -0.07
RFFL-205ENST00000415395 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
RFFL-205ENST00000415395 CCDC30Q5VVM6 783 aa14.59□□□□□ -0.07
RFFL-205ENST00000415395 ABCC4O15439 1325 aa14.59□□□□□ -0.07
RFFL-205ENST00000415395 C8orf34Q49A92 452 aa14.58□□□□□ -0.07
RFFL-205ENST00000415395 SLC52A2Q9HAB3 445 aa14.58□□□□□ -0.07
RFFL-205ENST00000415395 DISP2A7MBM2 1401 aa14.58□□□□□ -0.08
RFFL-205ENST00000415395 NKX1-1Q15270 411 aaPredicted RBP14.58□□□□□ -0.08
RFFL-205ENST00000415395 STK31Q9BXU1 1019 aa14.58□□□□□ -0.08
RFFL-205ENST00000415395 TNNQ9UQP3 1299 aa14.58□□□□□ -0.08
RFFL-205ENST00000415395 HEG1Q9ULI3 1381 aa14.57□□□□□ -0.08
RFFL-205ENST00000415395 N4BP2Q86UW6 1770 aaPredicted RBP14.57□□□□□ -0.08
RFFL-205ENST00000415395 SLIT2O94813 1529 aa14.56□□□□□ -0.08
RFFL-205ENST00000415395 GSE1Q14687 1217 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 TMEM57Q8N5G2 664 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 CDCA7Q9BWT1 371 aaPredicted RBP14.55□□□□□ -0.08
RFFL-205ENST00000415395 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
RFFL-205ENST00000415395 ERVV-2B6SEH9 535 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 BECN1Q14457 450 aa14.55□□□□□ -0.08
RFFL-205ENST00000415395 SPATA31A6Q5VVP1 1343 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 LRP6O75581 1613 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 PAPPAQ13219 1627 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 RGS12O14924 1447 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 RGS3P49796 1198 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
RFFL-205ENST00000415395 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
RFFL-205ENST00000415395 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
RFFL-205ENST00000415395 ZNF790Q6PG37 636 aa14.53□□□□□ -0.08
RFFL-205ENST00000415395 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.53□□□□□ -0.08
RFFL-205ENST00000415395 ADAMTS2O95450 1211 aa14.52□□□□□ -0.08
RFFL-205ENST00000415395 INTS3Q68E01 1043 aaKnown RBP14.52□□□□□ -0.08
RFFL-205ENST00000415395 UPF2Q9HAU5 1272 aaKnown RBP14.52□□□□□ -0.08
RFFL-205ENST00000415395 PXDNLA1KZ92 1463 aa14.52□□□□□ -0.08
RFFL-205ENST00000415395 LAMB4A4D0S4 1761 aa14.52□□□□□ -0.08
RFFL-205ENST00000415395 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
RFFL-205ENST00000415395 CABP4P57796 275 aa14.52□□□□□ -0.09
RFFL-205ENST00000415395 NFATC2IPQ8NCF5 419 aa14.52□□□□□ -0.09
RFFL-205ENST00000415395 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.09
RFFL-205ENST00000415395 TNS2Q63HR2 1409 aa14.52□□□□□ -0.09
RFFL-205ENST00000415395 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.09
RFFL-205ENST00000415395 C5P01031 1676 aa14.51□□□□□ -0.09
RFFL-205ENST00000415395 SPATA31A1Q5TZJ5 1347 aa14.51□□□□□ -0.09
RFFL-205ENST00000415395 KCNQ3O43525 872 aa14.51□□□□□ -0.09
RFFL-205ENST00000415395 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
RFFL-205ENST00000415395 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
RFFL-205ENST00000415395 NUTM2AQ8IVF1 878 aaPredicted RBP14.5□□□□□ -0.09
RFFL-205ENST00000415395 ZBTB7BO15156 539 aaPredicted RBP14.49□□□□□ -0.09
RFFL-205ENST00000415395 FLIIQ13045 1269 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 TTC5Q8N0Z6 440 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 RWDD1Q9H446 243 aaPredicted RBP14.49□□□□□ -0.09
RFFL-205ENST00000415395 SPATA31A5Q5VU36 1347 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 SPATA31A7Q8IWB4 1347 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 SKAP1Q86WV1 359 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 DBF4Q9UBU7 674 aaPredicted RBP14.49□□□□□ -0.09
RFFL-205ENST00000415395 GLI3P10071 1580 aa14.49□□□□□ -0.09
RFFL-205ENST00000415395 ITGB4P16144 1822 aa14.48□□□□□ -0.09
RFFL-205ENST00000415395 CCT4P50991 539 aaKnown RBP14.48□□□□□ -0.09
RFFL-205ENST00000415395 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms