RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 EYA1Q99502 592 aa16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 ABCC4O15439 1325 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
SSR4P1-201ENST00000415143 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.31
SSR4P1-201ENST00000415143 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
SSR4P1-201ENST00000415143 IP6K1Q92551 441 aa16.96■□□□□ 0.31
SSR4P1-201ENST00000415143 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
SSR4P1-201ENST00000415143 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
SSR4P1-201ENST00000415143 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
SSR4P1-201ENST00000415143 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
SSR4P1-201ENST00000415143 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
SSR4P1-201ENST00000415143 MCM10Q7L590 875 aa16.94■□□□□ 0.3
SSR4P1-201ENST00000415143 ZNF784Q8NCA9 323 aaPredicted RBP16.94■□□□□ 0.3
SSR4P1-201ENST00000415143 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
SSR4P1-201ENST00000415143 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
SSR4P1-201ENST00000415143 CRB1P82279 1406 aa16.94■□□□□ 0.3
SSR4P1-201ENST00000415143 BECN1Q14457 450 aa16.92■□□□□ 0.3
SSR4P1-201ENST00000415143 INTS3Q68E01 1043 aaKnown RBP16.92■□□□□ 0.3
SSR4P1-201ENST00000415143 CAMKK2Q96RR4 588 aa16.92■□□□□ 0.3
SSR4P1-201ENST00000415143 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
SSR4P1-201ENST00000415143 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
SSR4P1-201ENST00000415143 NRAPQ86VF7 1730 aa16.91■□□□□ 0.3
SSR4P1-201ENST00000415143 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
SSR4P1-201ENST00000415143 NUCB1Q02818 461 aa16.91■□□□□ 0.3
SSR4P1-201ENST00000415143 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
SSR4P1-201ENST00000415143 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
SSR4P1-201ENST00000415143 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
SSR4P1-201ENST00000415143 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
SSR4P1-201ENST00000415143 RREB1Q92766 1687 aa16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 SPON1Q9HCB6 807 aa16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 NUP188Q5SRE5 1749 aa16.89■□□□□ 0.29
SSR4P1-201ENST00000415143 TRIM37O94972 964 aa16.88■□□□□ 0.29
SSR4P1-201ENST00000415143 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-201ENST00000415143 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
SSR4P1-201ENST00000415143 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
SSR4P1-201ENST00000415143 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-201ENST00000415143 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 UTRNP46939 3433 aa16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
SSR4P1-201ENST00000415143 KCNQ2O43526 872 aa16.86■□□□□ 0.29
SSR4P1-201ENST00000415143 APBA3O96018 575 aa16.86■□□□□ 0.29
SSR4P1-201ENST00000415143 LMOD2Q6P5Q4 547 aa16.86■□□□□ 0.29
SSR4P1-201ENST00000415143 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
SSR4P1-201ENST00000415143 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 HMMRO75330 724 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 NBPF14Q5TI25 921 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 NFAT5O94916 1531 aa16.85■□□□□ 0.29
SSR4P1-201ENST00000415143 PHRF1Q9P1Y6 1649 aaKnown RBP16.84■□□□□ 0.29
SSR4P1-201ENST00000415143 GCP02774 474 aa16.83■□□□□ 0.28
SSR4P1-201ENST00000415143 HOXB7P09629 217 aa16.83■□□□□ 0.28
SSR4P1-201ENST00000415143 ANKRD45Q5TZF3 282 aa16.83■□□□□ 0.28
SSR4P1-201ENST00000415143 CHD4Q14839 1912 aa16.82■□□□□ 0.28
SSR4P1-201ENST00000415143 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
SSR4P1-201ENST00000415143 ARHGEF25Q86VW2 580 aa16.82■□□□□ 0.28
SSR4P1-201ENST00000415143 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
SSR4P1-201ENST00000415143 SLIT3O75094 1523 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 USP19O94966 1318 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 BMP2KLQ5H9B9 411 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
SSR4P1-201ENST00000415143 LTN1O94822 1766 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 COL14A1Q05707 1796 aaKnown RBP16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 CRYBG1Q9Y4K1 1723 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 GNAI3P08754 354 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
SSR4P1-201ENST00000415143 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
SSR4P1-201ENST00000415143 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
SSR4P1-201ENST00000415143 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
SSR4P1-201ENST00000415143 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
SSR4P1-201ENST00000415143 TEFQ10587 303 aa16.78■□□□□ 0.28
SSR4P1-201ENST00000415143 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
SSR4P1-201ENST00000415143 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
SSR4P1-201ENST00000415143 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
SSR4P1-201ENST00000415143 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
SSR4P1-201ENST00000415143 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
SSR4P1-201ENST00000415143 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
SSR4P1-201ENST00000415143 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
SSR4P1-201ENST00000415143 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
SSR4P1-201ENST00000415143 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
SSR4P1-201ENST00000415143 GNAI2P04899 355 aa16.76■□□□□ 0.27
SSR4P1-201ENST00000415143 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
SSR4P1-201ENST00000415143 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms