RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
CNN3-203ENST00000415017 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
CNN3-203ENST00000415017 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
CNN3-203ENST00000415017 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
CNN3-203ENST00000415017 EP400Q96L91 3159 aa17.37■□□□□ 0.37
CNN3-203ENST00000415017 E9PSI1 815 aa17.36■□□□□ 0.37
CNN3-203ENST00000415017 GNAI1P63096 354 aa17.36■□□□□ 0.37
CNN3-203ENST00000415017 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
CNN3-203ENST00000415017 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
CNN3-203ENST00000415017 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
CNN3-203ENST00000415017 BTAF1O14981 1849 aa17.34■□□□□ 0.37
CNN3-203ENST00000415017 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
CNN3-203ENST00000415017 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
CNN3-203ENST00000415017 CICQ96RK0 1608 aaPredicted RBP17.34■□□□□ 0.37
CNN3-203ENST00000415017 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
CNN3-203ENST00000415017 TEFQ10587 303 aa17.33■□□□□ 0.36
CNN3-203ENST00000415017 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
CNN3-203ENST00000415017 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
CNN3-203ENST00000415017 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
CNN3-203ENST00000415017 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
CNN3-203ENST00000415017 CABP4P57796 275 aa17.31■□□□□ 0.36
CNN3-203ENST00000415017 PIGBQ92521 554 aa17.31■□□□□ 0.36
CNN3-203ENST00000415017 LY75O60449 1722 aa17.3■□□□□ 0.36
CNN3-203ENST00000415017 A0A0G2JS52 829 aa17.3■□□□□ 0.36
CNN3-203ENST00000415017 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
CNN3-203ENST00000415017 MYT1Q01538 1121 aa17.3■□□□□ 0.36
CNN3-203ENST00000415017 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
CNN3-203ENST00000415017 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
CNN3-203ENST00000415017 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
CNN3-203ENST00000415017 ILDR2Q71H61 639 aa17.29■□□□□ 0.36
CNN3-203ENST00000415017 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
CNN3-203ENST00000415017 FAM182BQ5T319 152 aa17.28■□□□□ 0.36
CNN3-203ENST00000415017 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
CNN3-203ENST00000415017 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
CNN3-203ENST00000415017 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
CNN3-203ENST00000415017 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
CNN3-203ENST00000415017 C5P01031 1676 aa17.27■□□□□ 0.36
CNN3-203ENST00000415017 KCNQ3O43525 872 aa17.27■□□□□ 0.36
CNN3-203ENST00000415017 KCNQ2O43526 872 aa17.27■□□□□ 0.36
CNN3-203ENST00000415017 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
CNN3-203ENST00000415017 ATG3Q9NT62 314 aa17.27■□□□□ 0.36
CNN3-203ENST00000415017 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
CNN3-203ENST00000415017 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.35
CNN3-203ENST00000415017 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.35
CNN3-203ENST00000415017 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.35
CNN3-203ENST00000415017 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
CNN3-203ENST00000415017 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
CNN3-203ENST00000415017 TJP1Q07157 1748 aa17.25■□□□□ 0.35
CNN3-203ENST00000415017 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
CNN3-203ENST00000415017 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
CNN3-203ENST00000415017 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
CNN3-203ENST00000415017 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
CNN3-203ENST00000415017 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
CNN3-203ENST00000415017 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
CNN3-203ENST00000415017 ASAP1Q9ULH1 1129 aa17.24■□□□□ 0.35
CNN3-203ENST00000415017 LAS1LQ9Y4W2 734 aaKnown RBP17.24■□□□□ 0.35
CNN3-203ENST00000415017 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
CNN3-203ENST00000415017 HOXB7P09629 217 aa17.23■□□□□ 0.35
CNN3-203ENST00000415017 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
CNN3-203ENST00000415017 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
CNN3-203ENST00000415017 VAMP4O75379 141 aa17.22■□□□□ 0.35
CNN3-203ENST00000415017 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
CNN3-203ENST00000415017 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
CNN3-203ENST00000415017 RREB1Q92766 1687 aa17.22■□□□□ 0.35
CNN3-203ENST00000415017 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
CNN3-203ENST00000415017 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
CNN3-203ENST00000415017 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
CNN3-203ENST00000415017 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
CNN3-203ENST00000415017 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
CNN3-203ENST00000415017 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
CNN3-203ENST00000415017 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
CNN3-203ENST00000415017 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
CNN3-203ENST00000415017 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
CNN3-203ENST00000415017 TWISTNBQ3B726 338 aaPredicted RBP17.18■□□□□ 0.34
CNN3-203ENST00000415017 MYH14Q7Z406 1995 aaKnown RBP17.18■□□□□ 0.34
CNN3-203ENST00000415017 TRIM37O94972 964 aa17.17■□□□□ 0.34
CNN3-203ENST00000415017 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
CNN3-203ENST00000415017 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
CNN3-203ENST00000415017 PLSCR1O15162 318 aa17.16■□□□□ 0.34
CNN3-203ENST00000415017 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
CNN3-203ENST00000415017 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
CNN3-203ENST00000415017 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
CNN3-203ENST00000415017 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
CNN3-203ENST00000415017 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
CNN3-203ENST00000415017 SIK1P57059 783 aa17.14■□□□□ 0.33
CNN3-203ENST00000415017 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
CNN3-203ENST00000415017 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
CNN3-203ENST00000415017 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
CNN3-203ENST00000415017 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
CNN3-203ENST00000415017 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
CNN3-203ENST00000415017 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
CNN3-203ENST00000415017 ITPK1Q13572 414 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 PDIA6Q15084 440 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 LRP10Q7Z4F1 713 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 PROM2Q8N271 834 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
CNN3-203ENST00000415017 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
CNN3-203ENST00000415017 DNAJC10Q8IXB1 793 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms