RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 IFNL2Q8IZJ0 200 aa14.56□□□□□ -0.08
LINC00330-201ENST00000414562 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
LINC00330-201ENST00000414562 NKX1-1Q15270 411 aaPredicted RBP14.56□□□□□ -0.08
LINC00330-201ENST00000414562 DDB1Q16531 1140 aa14.56□□□□□ -0.08
LINC00330-201ENST00000414562 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
LINC00330-201ENST00000414562 SEPT12Q8IYM1 358 aa14.56□□□□□ -0.08
LINC00330-201ENST00000414562 TSR2Q969E8 191 aaKnown RBP14.56□□□□□ -0.08
LINC00330-201ENST00000414562 CCDC136Q96JN2 1154 aa14.56□□□□□ -0.08
LINC00330-201ENST00000414562 KAT6BQ8WYB5 2073 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
LINC00330-201ENST00000414562 FANCIQ9NVI1 1328 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 ZNF853P0CG23 659 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
LINC00330-201ENST00000414562 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
LINC00330-201ENST00000414562 BCAR3O75815 825 aa14.54□□□□□ -0.08
LINC00330-201ENST00000414562 C1orf141Q5JVX7 400 aa14.54□□□□□ -0.08
LINC00330-201ENST00000414562 PTF1AQ7RTS3 328 aa14.54□□□□□ -0.08
LINC00330-201ENST00000414562 KCNQ3O43525 872 aa14.54□□□□□ -0.08
LINC00330-201ENST00000414562 HTATSF1O43719 755 aaKnown RBP14.54□□□□□ -0.08
LINC00330-201ENST00000414562 CANXP27824 592 aaKnown RBP14.54□□□□□ -0.08
LINC00330-201ENST00000414562 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
LINC00330-201ENST00000414562 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
LINC00330-201ENST00000414562 ITGB4P16144 1822 aa14.53□□□□□ -0.08
LINC00330-201ENST00000414562 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
LINC00330-201ENST00000414562 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
LINC00330-201ENST00000414562 CRBNQ96SW2 442 aa14.53□□□□□ -0.08
LINC00330-201ENST00000414562 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.09
LINC00330-201ENST00000414562 RARSP54136 660 aaKnown RBP14.52□□□□□ -0.09
LINC00330-201ENST00000414562 C20orf194Q5TEA3 1177 aa14.52□□□□□ -0.09
LINC00330-201ENST00000414562 RTF1Q92541 710 aaKnown RBP14.52□□□□□ -0.09
LINC00330-201ENST00000414562 A0A0G2JS52 829 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 CHL1O00533 1208 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 GNAI1P63096 354 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 NFATC2IPQ8NCF5 419 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 DCAF5Q96JK2 942 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 RGS12O14924 1447 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 DOT1LQ8TEK3 1739 aa14.51□□□□□ -0.09
LINC00330-201ENST00000414562 MRC1P22897 1456 aa14.5□□□□□ -0.09
LINC00330-201ENST00000414562 KCNQ2O43526 872 aa14.5□□□□□ -0.09
LINC00330-201ENST00000414562 IFT57Q9NWB7 429 aa14.5□□□□□ -0.09
LINC00330-201ENST00000414562 RXRBP28702 533 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 SLC39A6Q13433 755 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 FRAT1Q92837 279 aaPredicted RBP14.49□□□□□ -0.09
LINC00330-201ENST00000414562 ACSBG1Q96GR2 724 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 CFAP44Q96MT7 982 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 SLC52A2Q9HAB3 445 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 KDM3BQ7LBC6 1761 aa14.49□□□□□ -0.09
LINC00330-201ENST00000414562 TAF7Q15545 349 aaPredicted RBP14.48□□□□□ -0.09
LINC00330-201ENST00000414562 TSPYL6Q8N831 410 aa14.48□□□□□ -0.09
LINC00330-201ENST00000414562 PIGBQ92521 554 aa14.48□□□□□ -0.09
LINC00330-201ENST00000414562 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
LINC00330-201ENST00000414562 SBF2Q86WG5 1849 aa14.48□□□□□ -0.09
LINC00330-201ENST00000414562 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
LINC00330-201ENST00000414562 C8orf58Q8NAV2 365 aa14.48□□□□□ -0.09
LINC00330-201ENST00000414562 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.09
LINC00330-201ENST00000414562 ERVV-2B6SEH9 535 aa14.46□□□□□ -0.1
LINC00330-201ENST00000414562 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.1
LINC00330-201ENST00000414562 CABP4P57796 275 aa14.46□□□□□ -0.1
LINC00330-201ENST00000414562 TEFQ10587 303 aa14.46□□□□□ -0.1
LINC00330-201ENST00000414562 PDE3AQ14432 1141 aa14.46□□□□□ -0.1
LINC00330-201ENST00000414562 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 ELL2O00472 640 aaPredicted RBP14.45□□□□□ -0.1
LINC00330-201ENST00000414562 BCL9O00512 1426 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 KRT27Q7Z3Y8 459 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 TSPYL4Q9UJ04 414 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 PAPPAQ13219 1627 aa14.45□□□□□ -0.1
LINC00330-201ENST00000414562 BTBD11A6QL63 1104 aa14.44□□□□□ -0.1
LINC00330-201ENST00000414562 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
LINC00330-201ENST00000414562 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
LINC00330-201ENST00000414562 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
LINC00330-201ENST00000414562 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 SYTL4Q96C24 671 aaPredicted RBP14.42□□□□□ -0.1
LINC00330-201ENST00000414562 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
LINC00330-201ENST00000414562 SLC4A9Q96Q91 983 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 UBR2Q8IWV8 1755 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 HEG1Q9ULI3 1381 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 MS4A1P11836 297 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 ZNF790Q6PG37 636 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 KCPQ6ZWJ8 1503 aa14.42□□□□□ -0.1
LINC00330-201ENST00000414562 VAMP4O75379 141 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 ALDH1L2Q3SY69 923 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 BTAF1O14981 1849 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 C5P01031 1676 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 NHSQ6T4R5 1651 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 TCERG1O14776 1098 aaKnown RBP14.41□□□□□ -0.1
LINC00330-201ENST00000414562 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
LINC00330-201ENST00000414562 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
LINC00330-201ENST00000414562 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
LINC00330-201ENST00000414562 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
LINC00330-201ENST00000414562 CLUAP1Q96AJ1 413 aa14.39□□□□□ -0.11
LINC00330-201ENST00000414562 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
LINC00330-201ENST00000414562 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms