RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
VTA1P1-201ENST00000414044 CLN3Q13286 438 aa8.13□□□□□ -1.11
VTA1P1-201ENST00000414044 SLFNL1Q499Z3 407 aa8.13□□□□□ -1.11
VTA1P1-201ENST00000414044 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
VTA1P1-201ENST00000414044 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
VTA1P1-201ENST00000414044 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 GNRH1P01148 92 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 KRT76Q01546 638 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 KANK4Q5T7N3 995 aaPredicted RBP8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
VTA1P1-201ENST00000414044 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 SCTRP47872 440 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 FOXR1Q6PIV2 292 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 SND1Q7KZF4 910 aaKnown RBP eCLIP8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 PLEKHM2Q8IWE5 1019 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 VWA5B2Q8N398 1253 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 CNTNAP3BQ96NU0 1288 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 CNTNAP3Q9BZ76 1288 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 DOLKQ9UPQ8 538 aa8.11□□□□□ -1.11
VTA1P1-201ENST00000414044 SKIP12755 728 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 USP4Q13107 963 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 RNF135Q8IUD6 432 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
VTA1P1-201ENST00000414044 H7C1W4 665 aa8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 SLURP2P0DP57 97 aa8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 WDR44Q5JSH3 913 aa8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
VTA1P1-201ENST00000414044 RHOQP17081 205 aa8.08□□□□□ -1.12
VTA1P1-201ENST00000414044 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
VTA1P1-201ENST00000414044 NOVA2Q9UNW9 492 aaKnown RBP8.08□□□□□ -1.12
VTA1P1-201ENST00000414044 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
VTA1P1-201ENST00000414044 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 RIPOR1Q6ZS17 1223 aa8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 TAS1R3Q7RTX0 852 aa8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 ESYT1Q9BSJ8 1104 aa8.07□□□□□ -1.12
VTA1P1-201ENST00000414044 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 WASLO00401 505 aaPredicted RBP8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 KCNMA1Q12791 1236 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 MAP7D1Q3KQU3 841 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 CNKSR1Q969H4 720 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 GRIP2Q9C0E4 1043 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L21D6R901 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 POU4F2Q12837 409 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 GNASQ5JWF2 1037 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 TRERF1Q96PN7 1200 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 RAB6BQ9NRW1 208 aa8.05□□□□□ -1.12
VTA1P1-201ENST00000414044 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 NCOA4Q13772 614 aa8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 SVOPQ8N4V2 548 aa8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 ZNF428Q96B54 188 aa8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 ZNF837Q96EG3 531 aaPredicted RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 ZSCAN10Q96SZ4 725 aaPredicted RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 CDCA7Q9BWT1 371 aaPredicted RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 MKRN1Q9UHC7 482 aaKnown RBP8.04□□□□□ -1.12
VTA1P1-201ENST00000414044 SRSF11Q05519 484 aaKnown RBP8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 CRTC2Q53ET0 693 aaPredicted RBP8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 TMEM214Q6NUQ4 689 aaKnown RBP8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
VTA1P1-201ENST00000414044 LZTS3O60299 673 aaPredicted RBP8.02□□□□□ -1.13
VTA1P1-201ENST00000414044 IL2RAP01589 272 aa8.02□□□□□ -1.13
VTA1P1-201ENST00000414044 F11P03951 625 aa8.02□□□□□ -1.13
VTA1P1-201ENST00000414044 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
VTA1P1-201ENST00000414044 CENPCQ03188 943 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms