RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 LY75O60449 1722 aa17.57■□□□□ 0.4
SSB-203ENST00000413002 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
SSB-203ENST00000413002 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
SSB-203ENST00000413002 ITPK1Q13572 414 aa17.55■□□□□ 0.4
SSB-203ENST00000413002 SLC4A9Q96Q91 983 aa17.55■□□□□ 0.4
SSB-203ENST00000413002 SPON1Q9HCB6 807 aa17.55■□□□□ 0.4
SSB-203ENST00000413002 PNPLA7Q6ZV29 1317 aa17.54■□□□□ 0.4
SSB-203ENST00000413002 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
SSB-203ENST00000413002 FCHSD2O94868 740 aa17.54■□□□□ 0.4
SSB-203ENST00000413002 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
SSB-203ENST00000413002 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
SSB-203ENST00000413002 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
SSB-203ENST00000413002 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
SSB-203ENST00000413002 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
SSB-203ENST00000413002 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
SSB-203ENST00000413002 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
SSB-203ENST00000413002 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
SSB-203ENST00000413002 AMIGO3Q86WK7 504 aa17.52■□□□□ 0.4
SSB-203ENST00000413002 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.4
SSB-203ENST00000413002 CASZ1Q86V15 1759 aa17.52■□□□□ 0.4
SSB-203ENST00000413002 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
SSB-203ENST00000413002 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
SSB-203ENST00000413002 COL23A1Q86Y22 540 aaPredicted RBP17.51■□□□□ 0.39
SSB-203ENST00000413002 LRP5O75197 1615 aa17.5■□□□□ 0.39
SSB-203ENST00000413002 PHF14O94880 888 aa17.5■□□□□ 0.39
SSB-203ENST00000413002 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
SSB-203ENST00000413002 AK7Q96M32 723 aa17.5■□□□□ 0.39
SSB-203ENST00000413002 PTGER2P43116 358 aa17.49■□□□□ 0.39
SSB-203ENST00000413002 DCTN1Q14203 1278 aa17.49■□□□□ 0.39
SSB-203ENST00000413002 MTFR1LQ9H019 292 aa17.49■□□□□ 0.39
SSB-203ENST00000413002 PPP1R1BQ9UD71 204 aaPredicted RBP17.49■□□□□ 0.39
SSB-203ENST00000413002 C5P01031 1676 aa17.48■□□□□ 0.39
SSB-203ENST00000413002 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
SSB-203ENST00000413002 MCM10Q7L590 875 aa17.48■□□□□ 0.39
SSB-203ENST00000413002 GNPATO15228 680 aa17.47■□□□□ 0.39
SSB-203ENST00000413002 TEFQ10587 303 aa17.47■□□□□ 0.39
SSB-203ENST00000413002 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
SSB-203ENST00000413002 PLEKHF1Q96S99 279 aa17.47■□□□□ 0.39
SSB-203ENST00000413002 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
SSB-203ENST00000413002 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
SSB-203ENST00000413002 MRC1P22897 1456 aa17.45■□□□□ 0.38
SSB-203ENST00000413002 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
SSB-203ENST00000413002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
SSB-203ENST00000413002 NEFMP07197 916 aa17.44■□□□□ 0.38
SSB-203ENST00000413002 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
SSB-203ENST00000413002 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
SSB-203ENST00000413002 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
SSB-203ENST00000413002 SGIP1Q9BQI5 828 aa17.44■□□□□ 0.38
SSB-203ENST00000413002 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
SSB-203ENST00000413002 KCNQ3O43525 872 aa17.43■□□□□ 0.38
SSB-203ENST00000413002 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
SSB-203ENST00000413002 SLC16A10Q8TF71 515 aa17.43■□□□□ 0.38
SSB-203ENST00000413002 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
SSB-203ENST00000413002 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
SSB-203ENST00000413002 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
SSB-203ENST00000413002 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSB-203ENST00000413002 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
SSB-203ENST00000413002 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
SSB-203ENST00000413002 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
SSB-203ENST00000413002 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
SSB-203ENST00000413002 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
SSB-203ENST00000413002 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
SSB-203ENST00000413002 FLAD1Q8NFF5 587 aa17.41■□□□□ 0.38
SSB-203ENST00000413002 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
SSB-203ENST00000413002 ARXQ96QS3 562 aa17.41■□□□□ 0.38
SSB-203ENST00000413002 SSFA2P28290 1259 aa17.4■□□□□ 0.38
SSB-203ENST00000413002 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
SSB-203ENST00000413002 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
SSB-203ENST00000413002 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SSB-203ENST00000413002 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
SSB-203ENST00000413002 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
SSB-203ENST00000413002 KCPQ6ZWJ8 1503 aa17.4■□□□□ 0.38
SSB-203ENST00000413002 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
SSB-203ENST00000413002 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
SSB-203ENST00000413002 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SSB-203ENST00000413002 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
SSB-203ENST00000413002 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
SSB-203ENST00000413002 QSER1Q2KHR3 1735 aa17.38■□□□□ 0.37
SSB-203ENST00000413002 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SSB-203ENST00000413002 RPS6KA4O75676 772 aa17.38■□□□□ 0.37
SSB-203ENST00000413002 CYP19A1P11511 503 aaPredicted RBP17.38■□□□□ 0.37
SSB-203ENST00000413002 POLD1P28340 1107 aa17.38■□□□□ 0.37
SSB-203ENST00000413002 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
SSB-203ENST00000413002 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
SSB-203ENST00000413002 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
SSB-203ENST00000413002 ARHGEF1Q92888 912 aaKnown RBP17.38■□□□□ 0.37
SSB-203ENST00000413002 RIPK4P57078 832 aa17.37■□□□□ 0.37
SSB-203ENST00000413002 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
SSB-203ENST00000413002 TJP1Q07157 1748 aa17.36■□□□□ 0.37
SSB-203ENST00000413002 ANP32CO43423 234 aa17.36■□□□□ 0.37
SSB-203ENST00000413002 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
SSB-203ENST00000413002 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
SSB-203ENST00000413002 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
SSB-203ENST00000413002 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
SSB-203ENST00000413002 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
SSB-203ENST00000413002 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
SSB-203ENST00000413002 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
SSB-203ENST00000413002 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
SSB-203ENST00000413002 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
SSB-203ENST00000413002 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms