RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 GLTPD2A6NH11 291 aa13.29□□□□□ -0.28
SOX9-AS1-201ENST00000412640 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
SOX9-AS1-201ENST00000412640 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
SOX9-AS1-201ENST00000412640 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
SOX9-AS1-201ENST00000412640 ADRA2BP18089 450 aa13.28□□□□□ -0.28
SOX9-AS1-201ENST00000412640 TMF1P82094 1093 aa13.28□□□□□ -0.28
SOX9-AS1-201ENST00000412640 RASSF7Q02833 373 aa13.28□□□□□ -0.28
SOX9-AS1-201ENST00000412640 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
SOX9-AS1-201ENST00000412640 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
SOX9-AS1-201ENST00000412640 SBF1O95248 1867 aa13.27□□□□□ -0.28
SOX9-AS1-201ENST00000412640 POTECB2RU33 542 aa13.27□□□□□ -0.29
SOX9-AS1-201ENST00000412640 VEGFBP49765 207 aa13.27□□□□□ -0.29
SOX9-AS1-201ENST00000412640 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.29
SOX9-AS1-201ENST00000412640 WBP1LQ9NX94 342 aa13.27□□□□□ -0.29
SOX9-AS1-201ENST00000412640 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.29
SOX9-AS1-201ENST00000412640 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
SOX9-AS1-201ENST00000412640 HSPA8P11142 646 aaKnown RBP13.26□□□□□ -0.29
SOX9-AS1-201ENST00000412640 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
SOX9-AS1-201ENST00000412640 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 CHRNA5P30532 468 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 SIK1P57059 783 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 ITPK1Q13572 414 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
SOX9-AS1-201ENST00000412640 PIGBQ92521 554 aa13.24□□□□□ -0.29
SOX9-AS1-201ENST00000412640 TNRC18O15417 2968 aaPredicted RBP13.24□□□□□ -0.29
SOX9-AS1-201ENST00000412640 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 C4AP0C0L4 1744 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 FBLN1P23142 703 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
SOX9-AS1-201ENST00000412640 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 SBNO2Q9Y2G9 1366 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 GYS1P13807 737 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 LMNB1P20700 586 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 HOXC9P31274 260 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
SOX9-AS1-201ENST00000412640 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
SOX9-AS1-201ENST00000412640 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
SOX9-AS1-201ENST00000412640 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.3
SOX9-AS1-201ENST00000412640 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 ITGB4P16144 1822 aa13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 CYP27B1O15528 508 aa13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 AMPHP49418 695 aa13.2□□□□□ -0.3
SOX9-AS1-201ENST00000412640 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
SOX9-AS1-201ENST00000412640 MAP3K19Q56UN5 1328 aa13.19□□□□□ -0.3
SOX9-AS1-201ENST00000412640 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
SOX9-AS1-201ENST00000412640 RFC4P35249 363 aa13.18□□□□□ -0.3
SOX9-AS1-201ENST00000412640 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
SOX9-AS1-201ENST00000412640 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
SOX9-AS1-201ENST00000412640 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
SOX9-AS1-201ENST00000412640 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
SOX9-AS1-201ENST00000412640 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
SOX9-AS1-201ENST00000412640 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
SOX9-AS1-201ENST00000412640 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
SOX9-AS1-201ENST00000412640 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
SOX9-AS1-201ENST00000412640 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
SOX9-AS1-201ENST00000412640 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
SOX9-AS1-201ENST00000412640 DDR1Q08345 913 aa13.15□□□□□ -0.3
SOX9-AS1-201ENST00000412640 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
SOX9-AS1-201ENST00000412640 NFKBIEO00221 500 aa13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 FKBP8Q14318 412 aa13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
SOX9-AS1-201ENST00000412640 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
SOX9-AS1-201ENST00000412640 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
SOX9-AS1-201ENST00000412640 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
SOX9-AS1-201ENST00000412640 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
SOX9-AS1-201ENST00000412640 RASSF10A6NK89 507 aa13.11□□□□□ -0.31
SOX9-AS1-201ENST00000412640 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
SOX9-AS1-201ENST00000412640 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
SOX9-AS1-201ENST00000412640 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
SOX9-AS1-201ENST00000412640 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
SOX9-AS1-201ENST00000412640 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
SOX9-AS1-201ENST00000412640 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
SOX9-AS1-201ENST00000412640 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
SOX9-AS1-201ENST00000412640 COG3Q96JB2 828 aa13.1□□□□□ -0.31
SOX9-AS1-201ENST00000412640 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
SOX9-AS1-201ENST00000412640 POLRMTO00411 1230 aaKnown RBP13.09□□□□□ -0.31
SOX9-AS1-201ENST00000412640 KCNA4P22459 653 aa13.09□□□□□ -0.31
SOX9-AS1-201ENST00000412640 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
SOX9-AS1-201ENST00000412640 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
SOX9-AS1-201ENST00000412640 MIER1Q8N108 512 aa13.08□□□□□ -0.32
SOX9-AS1-201ENST00000412640 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
SOX9-AS1-201ENST00000412640 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms