RNA–Protein interactions for RNA: ENST00000412575.1

SYN3-203, Transcript of synapsin III, humanhuman

TSL 5

Gene SYN3, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-203ENST00000412575 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
SYN3-203ENST00000412575 TOGARAM1Q9Y4F4 1720 aa9.5□□□□□ -0.89
SYN3-203ENST00000412575 IL16Q14005 1332 aa9.5□□□□□ -0.89
SYN3-203ENST00000412575 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
SYN3-203ENST00000412575 CHL1O00533 1208 aa9.49□□□□□ -0.89
SYN3-203ENST00000412575 PTF1AQ7RTS3 328 aa9.49□□□□□ -0.89
SYN3-203ENST00000412575 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYN3-203ENST00000412575 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
SYN3-203ENST00000412575 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
SYN3-203ENST00000412575 DOT1LQ8TEK3 1739 aa9.48□□□□□ -0.89
SYN3-203ENST00000412575 SIPA1L3O60292 1781 aaPredicted RBP9.48□□□□□ -0.89
SYN3-203ENST00000412575 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
SYN3-203ENST00000412575 ZNF790Q6PG37 636 aa9.48□□□□□ -0.89
SYN3-203ENST00000412575 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
SYN3-203ENST00000412575 IFT57Q9NWB7 429 aa9.48□□□□□ -0.89
SYN3-203ENST00000412575 BTBD11A6QL63 1104 aa9.47□□□□□ -0.89
SYN3-203ENST00000412575 GNAI1P63096 354 aa9.47□□□□□ -0.89
SYN3-203ENST00000412575 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
SYN3-203ENST00000412575 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
SYN3-203ENST00000412575 ASAP1Q9ULH1 1129 aa9.47□□□□□ -0.89
SYN3-203ENST00000412575 APBA3O96018 575 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 SF3B2Q13435 895 aaKnown RBP9.46□□□□□ -0.9
SYN3-203ENST00000412575 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 PROM2Q8N271 834 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 CAMKK2Q96RR4 588 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 BTAF1O14981 1849 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
SYN3-203ENST00000412575 TNS1Q9HBL0 1735 aaKnown RBP9.45□□□□□ -0.9
SYN3-203ENST00000412575 BAG6P46379 1132 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 GOLGA2Q08379 1002 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 TRMT2AQ8IZ69 625 aaKnown RBP9.45□□□□□ -0.9
SYN3-203ENST00000412575 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 RGPD3A6NKT7 1758 aaPredicted RBP9.45□□□□□ -0.9
SYN3-203ENST00000412575 RGPD4Q7Z3J3 1758 aa9.45□□□□□ -0.9
SYN3-203ENST00000412575 LOC102724428A0A0B4J2F2 783 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 KCNQ3O43525 872 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 SIK1P57059 783 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
SYN3-203ENST00000412575 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYN3-203ENST00000412575 FMNL2Q96PY5 1086 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
SYN3-203ENST00000412575 ZBED9Q6R2W3 1325 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 PAPPAQ13219 1627 aa9.44□□□□□ -0.9
SYN3-203ENST00000412575 UBR2Q8IWV8 1755 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 LY75O60449 1722 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 SOS1Q07889 1333 aaPredicted RBP9.43□□□□□ -0.9
SYN3-203ENST00000412575 E9PSI1 815 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 HOXB7P09629 217 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 SLFN5Q08AF3 891 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 TXNRD1Q16881 649 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 TTC5Q8N0Z6 440 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 ZNF496Q96IT1 587 aaPredicted RBP9.43□□□□□ -0.9
SYN3-203ENST00000412575 SLC4A9Q96Q91 983 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 TEX13AQ9BXU3 409 aaPredicted RBP9.43□□□□□ -0.9
SYN3-203ENST00000412575 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
SYN3-203ENST00000412575 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
SYN3-203ENST00000412575 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
SYN3-203ENST00000412575 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
SYN3-203ENST00000412575 SOCS7O14512 581 aa9.42□□□□□ -0.9
SYN3-203ENST00000412575 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
SYN3-203ENST00000412575 SNRPA1P09661 255 aaKnown RBP9.42□□□□□ -0.9
SYN3-203ENST00000412575 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
SYN3-203ENST00000412575 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
SYN3-203ENST00000412575 MYH16Q9H6N6 1097 aa9.42□□□□□ -0.9
SYN3-203ENST00000412575 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
SYN3-203ENST00000412575 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
SYN3-203ENST00000412575 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
SYN3-203ENST00000412575 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
SYN3-203ENST00000412575 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
SYN3-203ENST00000412575 EZH2Q15910 746 aaKnown RBP9.41□□□□□ -0.9
SYN3-203ENST00000412575 DEFB132Q7Z7B7 95 aa9.41□□□□□ -0.9
SYN3-203ENST00000412575 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
SYN3-203ENST00000412575 CCNL1Q9UK58 526 aaPredicted RBP9.41□□□□□ -0.9
SYN3-203ENST00000412575 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
SYN3-203ENST00000412575 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.9
SYN3-203ENST00000412575 ITPK1Q13572 414 aa9.4□□□□□ -0.9
SYN3-203ENST00000412575 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
SYN3-203ENST00000412575 RBM42Q9BTD8 480 aaKnown RBP9.4□□□□□ -0.9
SYN3-203ENST00000412575 STARD3NLO95772 234 aa9.39□□□□□ -0.91
SYN3-203ENST00000412575 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
SYN3-203ENST00000412575 CYP19A1P11511 503 aaPredicted RBP9.39□□□□□ -0.91
SYN3-203ENST00000412575 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
SYN3-203ENST00000412575 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
SYN3-203ENST00000412575 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
SYN3-203ENST00000412575 CNTNAP4Q9C0A0 1308 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 VAMP4O75379 141 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
SYN3-203ENST00000412575 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 ZNF428Q96B54 188 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 RREB1Q92766 1687 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
SYN3-203ENST00000412575 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
SYN3-203ENST00000412575 C5P01031 1676 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms