RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PRPF40AO75400 957 aaKnown RBP8.57□□□□□ -1.04
PTPN3-203ENST00000412145 TTC39AQ5SRH9 613 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC155Q8N6L0 562 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 UBAC1Q9BSL1 405 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 PLEKHO1Q53GL0 409 aaPredicted RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 DNAJC21Q5F1R6 531 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC183Q5T5S1 534 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 MPHOSPH6Q99547 160 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 FIBPO43427 364 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 SEC63Q9UGP8 760 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 BMP15O95972 392 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 ALDH3A1P30838 453 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC14Q49A88 953 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 LARP1BQ659C4 914 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 C10orf67Q8IYJ2 551 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 RAB3IL1Q8TBN0 382 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 JAKMIP2Q96AA8 810 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 HFM1A2PYH4 1435 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC171Q6TFL3 1326 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 ST20-MTHFSA0A0A6YYL1 179 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 NDC80O14777 642 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 ARID4AP29374 1257 aaPredicted RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 SSR1P43307 286 aaKnown RBP8.56□□□□□ -1.04
PTPN3-203ENST00000412145 FBXW7Q969H0 707 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 CLIP2Q9UDT6 1046 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 ATP2A1O14983 1001 aa8.56□□□□□ -1.04
PTPN3-203ENST00000412145 BLOC1S2Q6QNY1 142 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 USP25Q9UHP3 1055 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 U3KPZ7 1027 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-203ENST00000412145 FERMT2Q96AC1 680 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 TMCO5BA8MYB1 307 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 TIGD1Q96MW7 591 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 SMC6Q96SB8 1091 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 CEP135Q66GS9 1140 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN3-203ENST00000412145 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
PTPN3-203ENST00000412145 ANKRD30BQ9BXX2 1392 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 GAPVD1Q14C86 1478 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 OPA1O60313 960 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
PTPN3-203ENST00000412145 MPHOSPH10O00566 681 aaKnown RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 MAP7Q14244 749 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 CFAP100Q494V2 611 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 DDX19AQ9NUU7 478 aaKnown RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 WDR63Q8IWG1 891 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 KIF21BO75037 1637 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 CACNA2D4Q7Z3S7 1137 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 TACC1O75410 805 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 ZFYP08048 801 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 PROSER2Q86WR7 435 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 NAP1L3Q99457 506 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-203ENST00000412145 LNPKQ9C0E8 428 aa8.54□□□□□ -1.04
PTPN3-203ENST00000412145 CROCCP2Q86T23 111 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 A0A087WZG4 1122 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 TOP1P11387 765 aaKnown RBP8.53□□□□□ -1.04
PTPN3-203ENST00000412145 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC50Q8IVM0 306 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 ARFGAP2Q8N6H7 521 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 IQCGQ9H095 443 aaKnown RBP8.53□□□□□ -1.04
PTPN3-203ENST00000412145 RPGRIP1LQ68CZ1 1315 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 FAM193AP78312 1265 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 RAD54L2Q9Y4B4 1467 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 APAF1O14727 1248 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-203ENST00000412145 RMND1Q9NWS8 449 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 AKAP2Q9Y2D5 859 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 CTNNA2P26232 953 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 SKIDA1Q1XH10 827 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 TMOD2Q9NZR1 351 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 STIM2Q9P246 746 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 HSF2BPO75031 334 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 CLUL1Q15846 466 aa8.53□□□□□ -1.04
PTPN3-203ENST00000412145 SURF6O75683 361 aaKnown RBP8.52□□□□□ -1.04
PTPN3-203ENST00000412145 FAM184BQ9ULE4 1060 aa8.52□□□□□ -1.04
PTPN3-203ENST00000412145 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.04
PTPN3-203ENST00000412145 ZNF76P36508 570 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 SPAG1Q07617 926 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 GABPB2Q8TAK5 448 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-203ENST00000412145 SPECC1Q5M775 1068 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 ERCC6LQ2NKX8 1250 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 STX1AQ16623 288 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 PPP1R14CQ8TAE6 165 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 LMBR1Q8WVP7 490 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms