RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 C5P01031 1676 aa18.47■□□□□ 0.55
CPNE1-206ENST00000412056 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
CPNE1-206ENST00000412056 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
CPNE1-206ENST00000412056 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
CPNE1-206ENST00000412056 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
CPNE1-206ENST00000412056 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
CPNE1-206ENST00000412056 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
CPNE1-206ENST00000412056 MCM10Q7L590 875 aa18.45■□□□□ 0.54
CPNE1-206ENST00000412056 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
CPNE1-206ENST00000412056 TMPOP42166 694 aaKnown RBP18.44■□□□□ 0.54
CPNE1-206ENST00000412056 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-206ENST00000412056 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
CPNE1-206ENST00000412056 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
CPNE1-206ENST00000412056 KCNQ4P56696 695 aa18.43■□□□□ 0.54
CPNE1-206ENST00000412056 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
CPNE1-206ENST00000412056 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
CPNE1-206ENST00000412056 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
CPNE1-206ENST00000412056 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
CPNE1-206ENST00000412056 TEFQ10587 303 aa18.42■□□□□ 0.54
CPNE1-206ENST00000412056 COL5A3P25940 1745 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-206ENST00000412056 TJP1Q07157 1748 aa18.41■□□□□ 0.54
CPNE1-206ENST00000412056 RIPK4P57078 832 aa18.41■□□□□ 0.54
CPNE1-206ENST00000412056 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-206ENST00000412056 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 MIER1Q8N108 512 aa18.4■□□□□ 0.54
CPNE1-206ENST00000412056 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
CPNE1-206ENST00000412056 ANO8Q9HCE9 1232 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-206ENST00000412056 CICQ96RK0 1608 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-206ENST00000412056 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
CPNE1-206ENST00000412056 APAF1O14727 1248 aa18.39■□□□□ 0.53
CPNE1-206ENST00000412056 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
CPNE1-206ENST00000412056 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
CPNE1-206ENST00000412056 QSER1Q2KHR3 1735 aa18.38■□□□□ 0.53
CPNE1-206ENST00000412056 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
CPNE1-206ENST00000412056 SIK1P57059 783 aa18.38■□□□□ 0.53
CPNE1-206ENST00000412056 RBM42Q9BTD8 480 aaKnown RBP18.38■□□□□ 0.53
CPNE1-206ENST00000412056 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
CPNE1-206ENST00000412056 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
CPNE1-206ENST00000412056 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
CPNE1-206ENST00000412056 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
CPNE1-206ENST00000412056 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
CPNE1-206ENST00000412056 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
CPNE1-206ENST00000412056 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
CPNE1-206ENST00000412056 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-206ENST00000412056 ITPK1Q13572 414 aa18.35■□□□□ 0.53
CPNE1-206ENST00000412056 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
CPNE1-206ENST00000412056 NBPF14Q5TI25 921 aa18.35■□□□□ 0.53
CPNE1-206ENST00000412056 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
CPNE1-206ENST00000412056 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
CPNE1-206ENST00000412056 KCNQ3O43525 872 aa18.34■□□□□ 0.53
CPNE1-206ENST00000412056 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
CPNE1-206ENST00000412056 R3HDM1Q15032 1099 aaKnown RBP18.34■□□□□ 0.53
CPNE1-206ENST00000412056 STK32BQ9NY57 414 aa18.34■□□□□ 0.53
CPNE1-206ENST00000412056 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-206ENST00000412056 ZNF790Q6PG37 636 aa18.33■□□□□ 0.52
CPNE1-206ENST00000412056 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
CPNE1-206ENST00000412056 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
CPNE1-206ENST00000412056 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
CPNE1-206ENST00000412056 AKT1S1Q96B36 256 aa18.32■□□□□ 0.52
CPNE1-206ENST00000412056 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-206ENST00000412056 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CPNE1-206ENST00000412056 LAMB4A4D0S4 1761 aa18.31■□□□□ 0.52
CPNE1-206ENST00000412056 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CPNE1-206ENST00000412056 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
CPNE1-206ENST00000412056 AK7Q96M32 723 aa18.27■□□□□ 0.52
CPNE1-206ENST00000412056 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
CPNE1-206ENST00000412056 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
CPNE1-206ENST00000412056 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
CPNE1-206ENST00000412056 PDGFDQ9GZP0 370 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-206ENST00000412056 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
CPNE1-206ENST00000412056 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
CPNE1-206ENST00000412056 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-206ENST00000412056 PNPLA7Q6ZV29 1317 aa18.25■□□□□ 0.51
CPNE1-206ENST00000412056 CNTNAP4Q9C0A0 1308 aa18.25■□□□□ 0.51
CPNE1-206ENST00000412056 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
CPNE1-206ENST00000412056 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
CPNE1-206ENST00000412056 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
CPNE1-206ENST00000412056 LAS1LQ9Y4W2 734 aaKnown RBP18.25■□□□□ 0.51
CPNE1-206ENST00000412056 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
CPNE1-206ENST00000412056 GNPATO15228 680 aa18.24■□□□□ 0.51
CPNE1-206ENST00000412056 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
CPNE1-206ENST00000412056 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
CPNE1-206ENST00000412056 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
CPNE1-206ENST00000412056 CHL1O00533 1208 aa18.23■□□□□ 0.51
CPNE1-206ENST00000412056 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-206ENST00000412056 EIF4A1P60842 406 aaKnown RBP18.23■□□□□ 0.51
CPNE1-206ENST00000412056 RC3H1Q5TC82 1133 aaKnown RBP18.23■□□□□ 0.51
CPNE1-206ENST00000412056 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
CPNE1-206ENST00000412056 PHF14O94880 888 aa18.22■□□□□ 0.51
CPNE1-206ENST00000412056 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
CPNE1-206ENST00000412056 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
CPNE1-206ENST00000412056 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
CPNE1-206ENST00000412056 ZNF853P0CG23 659 aa18.21■□□□□ 0.51
CPNE1-206ENST00000412056 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
CPNE1-206ENST00000412056 INTS5Q6P9B9 1019 aaKnown RBP18.21■□□□□ 0.51
CPNE1-206ENST00000412056 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms