RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PTCD1O75127 700 aaKnown RBP15.91■□□□□ 0.14
NEDD1-202ENST00000411739 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
NEDD1-202ENST00000411739 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
NEDD1-202ENST00000411739 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 SLC15A2Q16348 729 aa15.9■□□□□ 0.14
NEDD1-202ENST00000411739 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
NEDD1-202ENST00000411739 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
NEDD1-202ENST00000411739 SIK1P57059 783 aa15.9■□□□□ 0.14
NEDD1-202ENST00000411739 SMIM5Q71RC9 77 aa15.9■□□□□ 0.14
NEDD1-202ENST00000411739 SLC4A9Q96Q91 983 aa15.89■□□□□ 0.13
NEDD1-202ENST00000411739 NEFMP07197 916 aa15.89■□□□□ 0.13
NEDD1-202ENST00000411739 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
NEDD1-202ENST00000411739 RRP7AQ9Y3A4 280 aaKnown RBP15.89■□□□□ 0.13
NEDD1-202ENST00000411739 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
NEDD1-202ENST00000411739 LY75O60449 1722 aa15.89■□□□□ 0.13
NEDD1-202ENST00000411739 ITPK1Q13572 414 aa15.88■□□□□ 0.13
NEDD1-202ENST00000411739 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
NEDD1-202ENST00000411739 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
NEDD1-202ENST00000411739 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
NEDD1-202ENST00000411739 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
NEDD1-202ENST00000411739 TEFQ10587 303 aa15.87■□□□□ 0.13
NEDD1-202ENST00000411739 LINC00116Q8NCU8 138 aa15.87■□□□□ 0.13
NEDD1-202ENST00000411739 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
NEDD1-202ENST00000411739 TFCP2L1Q9NZI6 479 aa15.87■□□□□ 0.13
NEDD1-202ENST00000411739 NFE2L2Q16236 605 aa15.86■□□□□ 0.13
NEDD1-202ENST00000411739 MRS2Q9HD23 443 aa15.86■□□□□ 0.13
NEDD1-202ENST00000411739 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
NEDD1-202ENST00000411739 ZBTB7AO95365 584 aa15.85■□□□□ 0.13
NEDD1-202ENST00000411739 PAPPAQ13219 1627 aa15.85■□□□□ 0.13
NEDD1-202ENST00000411739 KCNQ3O43525 872 aa15.85■□□□□ 0.13
NEDD1-202ENST00000411739 AMIGO3Q86WK7 504 aa15.85■□□□□ 0.13
NEDD1-202ENST00000411739 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
NEDD1-202ENST00000411739 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
NEDD1-202ENST00000411739 RIPK4P57078 832 aa15.84■□□□□ 0.13
NEDD1-202ENST00000411739 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
NEDD1-202ENST00000411739 CEMIPQ8WUJ3 1361 aa15.83■□□□□ 0.12
NEDD1-202ENST00000411739 MSH5O43196 834 aa15.83■□□□□ 0.12
NEDD1-202ENST00000411739 PHF14O94880 888 aa15.83■□□□□ 0.12
NEDD1-202ENST00000411739 RUNDC1Q96C34 613 aa15.83■□□□□ 0.12
NEDD1-202ENST00000411739 ADAMTS7Q9UKP4 1686 aa15.82■□□□□ 0.12
NEDD1-202ENST00000411739 MRC1P22897 1456 aa15.82■□□□□ 0.12
NEDD1-202ENST00000411739 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
NEDD1-202ENST00000411739 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
NEDD1-202ENST00000411739 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
NEDD1-202ENST00000411739 C5P01031 1676 aa15.81■□□□□ 0.12
NEDD1-202ENST00000411739 DNAJC10Q8IXB1 793 aa15.81■□□□□ 0.12
NEDD1-202ENST00000411739 AK7Q96M32 723 aa15.81■□□□□ 0.12
NEDD1-202ENST00000411739 DLG5Q8TDM6 1919 aa15.81■□□□□ 0.12
NEDD1-202ENST00000411739 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
NEDD1-202ENST00000411739 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
NEDD1-202ENST00000411739 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
NEDD1-202ENST00000411739 ZNF790Q6PG37 636 aa15.8■□□□□ 0.12
NEDD1-202ENST00000411739 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
NEDD1-202ENST00000411739 TAF1LQ8IZX4 1826 aa15.8■□□□□ 0.12
NEDD1-202ENST00000411739 APAF1O14727 1248 aa15.79■□□□□ 0.12
NEDD1-202ENST00000411739 GNPATO15228 680 aa15.79■□□□□ 0.12
NEDD1-202ENST00000411739 HTATSF1O43719 755 aaKnown RBP15.79■□□□□ 0.12
NEDD1-202ENST00000411739 C4BP0C0L5 1744 aa15.79■□□□□ 0.12
NEDD1-202ENST00000411739 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
NEDD1-202ENST00000411739 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
NEDD1-202ENST00000411739 TAF7Q15545 349 aaPredicted RBP15.77■□□□□ 0.12
NEDD1-202ENST00000411739 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.12
NEDD1-202ENST00000411739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.11
NEDD1-202ENST00000411739 PRAMEF22A3QJZ6 481 aa15.77■□□□□ 0.11
NEDD1-202ENST00000411739 MSL1Q68DK7 614 aa15.77■□□□□ 0.11
NEDD1-202ENST00000411739 TRIM35Q9UPQ4 493 aa15.77■□□□□ 0.11
NEDD1-202ENST00000411739 SIPA1L3O60292 1781 aaPredicted RBP15.76■□□□□ 0.11
NEDD1-202ENST00000411739 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
NEDD1-202ENST00000411739 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
NEDD1-202ENST00000411739 SPON1Q9HCB6 807 aa15.76■□□□□ 0.11
NEDD1-202ENST00000411739 SALL2Q9Y467 1007 aaPredicted RBP15.75■□□□□ 0.11
NEDD1-202ENST00000411739 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
NEDD1-202ENST00000411739 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
NEDD1-202ENST00000411739 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
NEDD1-202ENST00000411739 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
NEDD1-202ENST00000411739 DIEXFQ68CQ4 756 aaKnown RBP15.74■□□□□ 0.11
NEDD1-202ENST00000411739 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
NEDD1-202ENST00000411739 RTCBQ9Y3I0 505 aaKnown RBP15.74■□□□□ 0.11
NEDD1-202ENST00000411739 TJP1Q07157 1748 aa15.74■□□□□ 0.11
NEDD1-202ENST00000411739 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
NEDD1-202ENST00000411739 PIP4K2AP48426 406 aaPredicted RBP15.73■□□□□ 0.11
NEDD1-202ENST00000411739 HEG1Q9ULI3 1381 aa15.73■□□□□ 0.11
NEDD1-202ENST00000411739 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
NEDD1-202ENST00000411739 PTGER2P43116 358 aa15.73■□□□□ 0.11
NEDD1-202ENST00000411739 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
NEDD1-202ENST00000411739 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
NEDD1-202ENST00000411739 RC3H1Q5TC82 1133 aaKnown RBP15.72■□□□□ 0.11
NEDD1-202ENST00000411739 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
NEDD1-202ENST00000411739 LMOD3Q0VAK6 560 aa15.72■□□□□ 0.11
NEDD1-202ENST00000411739 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
NEDD1-202ENST00000411739 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
NEDD1-202ENST00000411739 CCDC87Q9NVE4 849 aa15.72■□□□□ 0.11
NEDD1-202ENST00000411739 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.11
NEDD1-202ENST00000411739 RPS6KA4O75676 772 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 A1BGP04217 495 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 SSFA2P28290 1259 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 PPP1R1BQ9UD71 204 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms