RNA–Protein interactions for RNA: ENST00000411496.1

TTC3-205, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-205ENST00000411496 CNKSR1Q969H4 720 aa9.79□□□□□ -0.84
TTC3-205ENST00000411496 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
TTC3-205ENST00000411496 AXIN1O15169 862 aa9.78□□□□□ -0.84
TTC3-205ENST00000411496 CLP1Q92989 425 aaKnown RBP9.78□□□□□ -0.84
TTC3-205ENST00000411496 SPINT1O43278 529 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 IL2RAP01589 272 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 GPC1P35052 558 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 SMTNP53814 917 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 SCARF1Q14162 830 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
TTC3-205ENST00000411496 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 RAB6BQ9NRW1 208 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 HRH3Q9Y5N1 445 aa9.77□□□□□ -0.85
TTC3-205ENST00000411496 MEN1O00255 615 aa9.76□□□□□ -0.85
TTC3-205ENST00000411496 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
TTC3-205ENST00000411496 A6NJY4 79 aa9.75□□□□□ -0.85
TTC3-205ENST00000411496 CENPCQ03188 943 aa9.75□□□□□ -0.85
TTC3-205ENST00000411496 MTFR1Q15390 333 aa9.75□□□□□ -0.85
TTC3-205ENST00000411496 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
TTC3-205ENST00000411496 GAS2L2Q8NHY3 880 aa9.75□□□□□ -0.85
TTC3-205ENST00000411496 SERTAD1Q9UHV2 236 aa9.75□□□□□ -0.85
TTC3-205ENST00000411496 CDK2AP1O14519 115 aa9.74□□□□□ -0.85
TTC3-205ENST00000411496 STAU1O95793 577 aaKnown RBP9.74□□□□□ -0.85
TTC3-205ENST00000411496 BMP2P12643 396 aa9.74□□□□□ -0.85
TTC3-205ENST00000411496 RNF144AP50876 292 aaPredicted RBP9.74□□□□□ -0.85
TTC3-205ENST00000411496 BRD1O95696 1058 aa9.73□□□□□ -0.85
TTC3-205ENST00000411496 EPHA4P54764 986 aa9.73□□□□□ -0.85
TTC3-205ENST00000411496 TLR1Q15399 786 aa9.73□□□□□ -0.85
TTC3-205ENST00000411496 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
TTC3-205ENST00000411496 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
TTC3-205ENST00000411496 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
TTC3-205ENST00000411496 WEE1P30291 646 aa9.72□□□□□ -0.85
TTC3-205ENST00000411496 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
TTC3-205ENST00000411496 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
TTC3-205ENST00000411496 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
TTC3-205ENST00000411496 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
TTC3-205ENST00000411496 PATL2C9JE40 543 aaKnown RBP9.71□□□□□ -0.86
TTC3-205ENST00000411496 IGFBP4P22692 258 aa9.71□□□□□ -0.86
TTC3-205ENST00000411496 FOXK2Q01167 660 aa9.71□□□□□ -0.86
TTC3-205ENST00000411496 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.86
TTC3-205ENST00000411496 GRIP2Q9C0E4 1043 aa9.71□□□□□ -0.86
TTC3-205ENST00000411496 AAASQ9NRG9 546 aa9.71□□□□□ -0.86
TTC3-205ENST00000411496 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 SSFA2P28290 1259 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 SLC27A3Q5K4L6 730 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
TTC3-205ENST00000411496 C1orf216Q8TAB5 229 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 POLMQ9NP87 494 aaPredicted RBP9.7□□□□□ -0.86
TTC3-205ENST00000411496 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
TTC3-205ENST00000411496 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
TTC3-205ENST00000411496 OCLNQ16625 522 aa9.69□□□□□ -0.86
TTC3-205ENST00000411496 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
TTC3-205ENST00000411496 STAG2Q8N3U4 1231 aa9.69□□□□□ -0.86
TTC3-205ENST00000411496 PRMT3O60678 531 aa9.68□□□□□ -0.86
TTC3-205ENST00000411496 CTSOP43234 321 aaPredicted RBP9.68□□□□□ -0.86
TTC3-205ENST00000411496 TMEM214Q6NUQ4 689 aaKnown RBP9.68□□□□□ -0.86
TTC3-205ENST00000411496 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
TTC3-205ENST00000411496 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
TTC3-205ENST00000411496 ATP13A2Q9NQ11 1180 aa9.68□□□□□ -0.86
TTC3-205ENST00000411496 CXXC1Q9P0U4 656 aaPredicted RBP9.68□□□□□ -0.86
TTC3-205ENST00000411496 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
TTC3-205ENST00000411496 CHMP3Q9Y3E7 222 aa9.68□□□□□ -0.86
TTC3-205ENST00000411496 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 FOXO3O43524 673 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 BMP1P13497 986 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 GNASQ5JWF2 1037 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
TTC3-205ENST00000411496 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 NIFKQ9BYG3 293 aaKnown RBP9.67□□□□□ -0.86
TTC3-205ENST00000411496 TSPAN10Q9H1Z9 355 aaPredicted RBP9.67□□□□□ -0.86
TTC3-205ENST00000411496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.862e-6■■■■■ 41.9
TTC3-205ENST00000411496 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
TTC3-205ENST00000411496 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
TTC3-205ENST00000411496 SPATA31C2B4DYI2 1134 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
TTC3-205ENST00000411496 PSMA6P60900 246 aaKnown RBP9.66□□□□□ -0.86
TTC3-205ENST00000411496 KCNA1Q09470 495 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 RHBDD1Q8TEB9 315 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
TTC3-205ENST00000411496 C21orf2O43822 256 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 TEAD4Q15561 434 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
TTC3-205ENST00000411496 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 COL26A1Q96A83 441 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
TTC3-205ENST00000411496 PTCD1O75127 700 aaKnown RBP9.64□□□□□ -0.87
TTC3-205ENST00000411496 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
TTC3-205ENST00000411496 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
TTC3-205ENST00000411496 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
TTC3-205ENST00000411496 SERTM1A2A2V5 107 aa9.63□□□□□ -0.87
TTC3-205ENST00000411496 Q6ZNB5 142 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms