RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TMCO3Q6UWJ1 677 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 NFXL1Q6ZNB6 911 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 ZBTB9Q96C00 473 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 FMNL2Q96PY5 1086 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 CARD10Q9BWT7 1032 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 FRMD3A2A2Y4 597 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 PSMD7P51665 324 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 SH2D4BQ5SQS7 431 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 NBPF10Q6P3W6 841 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 RUFY3Q7L099 469 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 WDR63Q8IWG1 891 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 AMOTL1Q8IY63 956 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 BHMTQ93088 406 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 VMP1Q96GC9 406 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 RGL2O15211 777 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 FLT3P36888 993 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 KIF11P52732 1056 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 SKOR1P84550 965 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 PRKG1Q13976 671 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 TRIM68Q6AZZ1 485 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC174Q6PII3 467 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 PPP1R21Q6ZMI0 780 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 IQCA1Q86XH1 822 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 KRT222Q8N1A0 295 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 CHMP4CQ96CF2 233 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 LRRC27Q9C0I9 530 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 KDM4CQ9H3R0 1056 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 C1orf115Q9H7X2 142 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 ANKRD18BA2A2Z9 1011 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 SCP2P22307 547 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 MKRN3Q13064 507 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 TRAF1Q13077 416 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 GIPC2Q8TF65 315 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 TSPAN18Q96SJ8 248 aa6.12□□□□□ -1.43
R3HDM1-204ENST00000410054 EZRP15311 586 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 MAP9Q49MG5 647 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 LMBRD2Q68DH5 695 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC110Q8TBZ0 833 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 TRIM4Q9C037 500 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC196A0A1B0GTZ2 297 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 KRT18P05783 430 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 CHRM1P11229 460 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 RLBP1P12271 317 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 TBC1D10BQ4KMP7 808 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 ANO1Q5XXA6 986 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 ICE2Q659A1 982 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 NAA25Q14CX7 972 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 NFE2L2Q16236 605 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 ZC4H2Q9NQZ6 224 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 LRRFIP2Q9Y608 721 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 EPS15P42566 896 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 TMED1Q13445 227 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 PLCB4Q15147 1175 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 SASS6Q6UVJ0 657 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 MRRFQ96E11 262 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 FSD1Q9BTV5 496 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 PUF60Q9UHX1 559 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 SUFUQ9UMX1 484 aa6.11□□□□□ -1.43
R3HDM1-204ENST00000410054 KCNA2P16389 499 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 SMC1AQ14683 1233 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 NFKBIBQ15653 356 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 KSR2Q6VAB6 950 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 HOOK3Q86VS8 718 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 TMCO5AQ8N6Q1 288 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC114Q96M63 670 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 CDKL5O76039 1030 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 PSMA4P25789 261 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 SKAP1Q86WV1 359 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 PCMTD1Q96MG8 357 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 SENP3Q9H4L4 574 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 DISC1Q9NRI5 854 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 ODF2LQ9ULJ1 636 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 STK25O00506 426 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 SDCCAG8Q86SQ7 713 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 RNF217Q8TC41 542 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 TRIM52Q96A61 297 aa6.1□□□□□ -1.43
R3HDM1-204ENST00000410054 HIP1RO75146 1068 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 RHOXF2BP0C7M4 288 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 SNX32Q86XE0 403 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 ZNF354CQ86Y25 554 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 RPS6KC1Q96S38 1066 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 RHOXF2Q9BQY4 288 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 UNC45AQ9H3U1 944 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 CFAP45Q9UL16 551 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 ERC2O15083 957 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 GMNNO75496 209 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 CLNS1AP54105 237 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 GNL2Q13823 731 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 ITM2BQ9Y287 266 aa6.09□□□□□ -1.43
R3HDM1-204ENST00000410054 DDX11L8A8MPP1 907 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms